Experiment: Bu1_10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02438 and H281DRAFT_02439 are separated by 137 nucleotides H281DRAFT_02439 and H281DRAFT_02440 overlap by 1 nucleotides
H281DRAFT_02438: H281DRAFT_02438 - 5S rRNA. Bacterial TSU, at 1 to 60
_02438
H281DRAFT_02439: H281DRAFT_02439 - Predicted secreted hydrolase, at 198 to 1,412
_02439
H281DRAFT_02440: H281DRAFT_02440 - putative ABC transport system permease protein, at 1,412 to 3,985
_02440
Position (kb) 0
1
2 Strain fitness (log2 ratio) -2
-1
0
1 at 0.301 kb on + strand at 0.315 kb on - strand at 0.746 kb on - strand, within H281DRAFT_02439 at 0.748 kb on + strand, within H281DRAFT_02439 at 0.749 kb on - strand, within H281DRAFT_02439 at 0.749 kb on - strand, within H281DRAFT_02439 at 0.826 kb on - strand, within H281DRAFT_02439 at 0.826 kb on - strand, within H281DRAFT_02439 at 0.923 kb on + strand, within H281DRAFT_02439 at 0.940 kb on + strand, within H281DRAFT_02439 at 1.128 kb on - strand, within H281DRAFT_02439 at 1.583 kb on + strand at 1.584 kb on - strand at 1.584 kb on - strand at 1.803 kb on + strand, within H281DRAFT_02440 at 1.803 kb on + strand, within H281DRAFT_02440 at 1.804 kb on - strand, within H281DRAFT_02440 at 1.804 kb on - strand, within H281DRAFT_02440 at 2.004 kb on - strand, within H281DRAFT_02440 at 2.107 kb on + strand, within H281DRAFT_02440 at 2.109 kb on + strand, within H281DRAFT_02440 at 2.116 kb on - strand, within H281DRAFT_02440 at 2.117 kb on + strand, within H281DRAFT_02440 at 2.118 kb on - strand, within H281DRAFT_02440 at 2.179 kb on + strand, within H281DRAFT_02440 at 2.179 kb on + strand, within H281DRAFT_02440 at 2.405 kb on + strand, within H281DRAFT_02440 at 2.406 kb on - strand, within H281DRAFT_02440
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_10 remove 301 + +0.8 315 - -0.5 746 - H281DRAFT_02439 0.45 -0.7 748 + H281DRAFT_02439 0.45 -0.2 749 - H281DRAFT_02439 0.45 -0.1 749 - H281DRAFT_02439 0.45 -0.7 826 - H281DRAFT_02439 0.52 -1.2 826 - H281DRAFT_02439 0.52 +0.8 923 + H281DRAFT_02439 0.60 +0.2 940 + H281DRAFT_02439 0.61 -0.2 1,128 - H281DRAFT_02439 0.77 -1.9 1,583 + +0.7 1,584 - +0.2 1,584 - -1.8 1,803 + H281DRAFT_02440 0.15 +0.5 1,803 + H281DRAFT_02440 0.15 -1.0 1,804 - H281DRAFT_02440 0.15 +0.3 1,804 - H281DRAFT_02440 0.15 +0.9 2,004 - H281DRAFT_02440 0.23 -0.2 2,107 + H281DRAFT_02440 0.27 -2.5 2,109 + H281DRAFT_02440 0.27 -0.3 2,116 - H281DRAFT_02440 0.27 +0.3 2,117 + H281DRAFT_02440 0.27 -0.8 2,118 - H281DRAFT_02440 0.27 +1.1 2,179 + H281DRAFT_02440 0.30 +0.3 2,179 + H281DRAFT_02440 0.30 -0.0 2,405 + H281DRAFT_02440 0.39 +0.6 2,406 - H281DRAFT_02440 0.39 -0.9
Or see this region's nucleotide sequence