Experiment: Bu1_10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01815 and H281DRAFT_01816 are separated by 165 nucleotides H281DRAFT_01816 and H281DRAFT_01817 are separated by 204 nucleotides H281DRAFT_01817 and H281DRAFT_01818 are separated by 34 nucleotides
H281DRAFT_01815: H281DRAFT_01815 - L-amino acid N-acyltransferase YncA, at 715,934 to 716,464
_01815
H281DRAFT_01816: H281DRAFT_01816 - Uncharacterized protein, contains GYD domain, at 716,630 to 716,923
_01816
H281DRAFT_01817: H281DRAFT_01817 - Hemolysin activation/secretion protein, at 717,128 to 718,867
_01817
H281DRAFT_01818: H281DRAFT_01818 - filamentous hemagglutinin family N-terminal domain-containing protein, at 718,902 to 721,166
_01818
Position (kb) 717
718
719 Strain fitness (log2 ratio) -2
-1
0
1 at 716.360 kb on + strand, within H281DRAFT_01815 at 716.403 kb on - strand, within H281DRAFT_01815 at 716.587 kb on - strand at 716.587 kb on - strand at 716.632 kb on - strand at 716.647 kb on + strand at 716.648 kb on - strand at 716.715 kb on - strand, within H281DRAFT_01816 at 716.914 kb on - strand at 716.914 kb on - strand at 716.914 kb on - strand at 717.026 kb on + strand at 717.432 kb on + strand, within H281DRAFT_01817 at 717.582 kb on + strand, within H281DRAFT_01817 at 717.721 kb on - strand, within H281DRAFT_01817 at 717.741 kb on - strand, within H281DRAFT_01817 at 717.903 kb on + strand, within H281DRAFT_01817 at 717.985 kb on - strand, within H281DRAFT_01817 at 718.308 kb on - strand, within H281DRAFT_01817 at 718.448 kb on + strand, within H281DRAFT_01817 at 718.448 kb on + strand, within H281DRAFT_01817 at 718.449 kb on - strand, within H281DRAFT_01817 at 718.449 kb on - strand, within H281DRAFT_01817 at 718.903 kb on + strand at 718.982 kb on - strand at 719.258 kb on - strand, within H281DRAFT_01818 at 719.707 kb on + strand, within H281DRAFT_01818 at 719.708 kb on - strand, within H281DRAFT_01818 at 719.768 kb on - strand, within H281DRAFT_01818 at 719.845 kb on + strand, within H281DRAFT_01818 at 719.846 kb on - strand, within H281DRAFT_01818 at 719.846 kb on - strand, within H281DRAFT_01818
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_10 remove 716,360 + H281DRAFT_01815 0.80 -0.2 716,403 - H281DRAFT_01815 0.88 +0.5 716,587 - -1.3 716,587 - -0.7 716,632 - -0.5 716,647 + -0.0 716,648 - +0.6 716,715 - H281DRAFT_01816 0.29 +0.8 716,914 - +0.3 716,914 - -0.0 716,914 - -0.6 717,026 + +1.0 717,432 + H281DRAFT_01817 0.17 +0.5 717,582 + H281DRAFT_01817 0.26 -0.5 717,721 - H281DRAFT_01817 0.34 -1.7 717,741 - H281DRAFT_01817 0.35 -0.9 717,903 + H281DRAFT_01817 0.45 -0.4 717,985 - H281DRAFT_01817 0.49 +0.6 718,308 - H281DRAFT_01817 0.68 -2.2 718,448 + H281DRAFT_01817 0.76 -0.5 718,448 + H281DRAFT_01817 0.76 +0.2 718,449 - H281DRAFT_01817 0.76 -0.3 718,449 - H281DRAFT_01817 0.76 -0.2 718,903 + +0.3 718,982 - +1.7 719,258 - H281DRAFT_01818 0.16 -0.2 719,707 + H281DRAFT_01818 0.36 -2.0 719,708 - H281DRAFT_01818 0.36 -1.2 719,768 - H281DRAFT_01818 0.38 -2.4 719,845 + H281DRAFT_01818 0.42 +0.5 719,846 - H281DRAFT_01818 0.42 -0.8 719,846 - H281DRAFT_01818 0.42 -0.1
Or see this region's nucleotide sequence