Experiment: Bu1_10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01802 and H281DRAFT_01803 are separated by 144 nucleotides H281DRAFT_01803 and H281DRAFT_01804 are separated by 165 nucleotides H281DRAFT_01804 and H281DRAFT_01805 are separated by 122 nucleotides
H281DRAFT_01802: H281DRAFT_01802 - Pimeloyl-ACP methyl ester carboxylesterase, at 702,858 to 703,739
_01802
H281DRAFT_01803: H281DRAFT_01803 - transcriptional regulator, HxlR family, at 703,884 to 704,339
_01803
H281DRAFT_01804: H281DRAFT_01804 - Predicted arabinose efflux permease, MFS family, at 704,505 to 705,749
_01804
H281DRAFT_01805: H281DRAFT_01805 - cardiolipin synthase, at 705,872 to 707,227
_01805
Position (kb) 704
705
706 Strain fitness (log2 ratio) -2
-1
0
1
2 at 703.513 kb on - strand, within H281DRAFT_01802 at 703.576 kb on - strand, within H281DRAFT_01802 at 703.576 kb on - strand, within H281DRAFT_01802 at 703.611 kb on + strand, within H281DRAFT_01802 at 703.808 kb on - strand at 703.873 kb on - strand at 703.873 kb on - strand at 703.885 kb on + strand at 703.886 kb on - strand at 703.886 kb on - strand at 703.953 kb on + strand, within H281DRAFT_01803 at 703.964 kb on + strand, within H281DRAFT_01803 at 704.099 kb on - strand, within H281DRAFT_01803 at 704.099 kb on - strand, within H281DRAFT_01803 at 704.181 kb on + strand, within H281DRAFT_01803 at 704.637 kb on + strand, within H281DRAFT_01804 at 704.922 kb on + strand, within H281DRAFT_01804 at 704.922 kb on + strand, within H281DRAFT_01804 at 704.923 kb on - strand, within H281DRAFT_01804 at 705.440 kb on + strand, within H281DRAFT_01804 at 705.582 kb on + strand, within H281DRAFT_01804 at 705.582 kb on + strand, within H281DRAFT_01804 at 705.630 kb on - strand at 705.638 kb on - strand at 705.638 kb on - strand at 705.748 kb on - strand at 705.751 kb on + strand at 705.751 kb on + strand at 705.918 kb on + strand at 706.158 kb on + strand, within H281DRAFT_01805 at 706.159 kb on - strand, within H281DRAFT_01805 at 706.197 kb on + strand, within H281DRAFT_01805 at 706.238 kb on + strand, within H281DRAFT_01805 at 706.691 kb on - strand, within H281DRAFT_01805 at 706.739 kb on + strand, within H281DRAFT_01805 at 706.740 kb on - strand, within H281DRAFT_01805
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_10 remove 703,513 - H281DRAFT_01802 0.74 +1.1 703,576 - H281DRAFT_01802 0.81 +0.5 703,576 - H281DRAFT_01802 0.81 +0.3 703,611 + H281DRAFT_01802 0.85 +0.1 703,808 - +2.1 703,873 - -1.1 703,873 - -2.4 703,885 + -2.0 703,886 - -0.9 703,886 - -0.5 703,953 + H281DRAFT_01803 0.15 -0.6 703,964 + H281DRAFT_01803 0.18 -0.6 704,099 - H281DRAFT_01803 0.47 +0.6 704,099 - H281DRAFT_01803 0.47 +0.3 704,181 + H281DRAFT_01803 0.65 -0.4 704,637 + H281DRAFT_01804 0.11 +0.3 704,922 + H281DRAFT_01804 0.33 -0.2 704,922 + H281DRAFT_01804 0.33 -1.0 704,923 - H281DRAFT_01804 0.34 -1.4 705,440 + H281DRAFT_01804 0.75 -0.2 705,582 + H281DRAFT_01804 0.87 -0.5 705,582 + H281DRAFT_01804 0.87 -0.0 705,630 - +0.4 705,638 - +0.0 705,638 - -0.7 705,748 - +0.9 705,751 + +1.1 705,751 + -0.6 705,918 + -0.5 706,158 + H281DRAFT_01805 0.21 +0.9 706,159 - H281DRAFT_01805 0.21 -0.5 706,197 + H281DRAFT_01805 0.24 -0.4 706,238 + H281DRAFT_01805 0.27 -1.7 706,691 - H281DRAFT_01805 0.60 -0.0 706,739 + H281DRAFT_01805 0.64 -0.2 706,740 - H281DRAFT_01805 0.64 +0.5
Or see this region's nucleotide sequence