Experiment: Bu1_10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01755 and H281DRAFT_01756 are separated by 1 nucleotides H281DRAFT_01756 and H281DRAFT_01757 overlap by 16 nucleotides H281DRAFT_01757 and H281DRAFT_01758 are separated by 35 nucleotides H281DRAFT_01758 and H281DRAFT_01759 are separated by 1 nucleotides
H281DRAFT_01755: H281DRAFT_01755 - histidine kinase (EC 2.7.13.3), at 651,160 to 652,824
_01755
H281DRAFT_01756: H281DRAFT_01756 - Anti-sigma regulatory factor (Ser/Thr protein kinase), at 652,826 to 653,815
_01756
H281DRAFT_01757: H281DRAFT_01757 - serine/threonine-protein kinase RsbT, at 653,800 to 654,162
_01757
H281DRAFT_01758: H281DRAFT_01758 - rsbT antagonist protein RsbS, at 654,198 to 654,581
_01758
H281DRAFT_01759: H281DRAFT_01759 - rsbT co-antagonist protein RsbR, at 654,583 to 655,452
_01759
Position (kb) 653
654
655 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 653.101 kb on + strand, within H281DRAFT_01756 at 653.101 kb on + strand, within H281DRAFT_01756 at 653.429 kb on - strand, within H281DRAFT_01756 at 653.475 kb on + strand, within H281DRAFT_01756 at 653.665 kb on - strand, within H281DRAFT_01756 at 654.264 kb on + strand, within H281DRAFT_01758 at 654.265 kb on - strand, within H281DRAFT_01758 at 654.265 kb on - strand, within H281DRAFT_01758 at 654.317 kb on + strand, within H281DRAFT_01758 at 654.318 kb on - strand, within H281DRAFT_01758 at 654.320 kb on + strand, within H281DRAFT_01758 at 654.321 kb on - strand, within H281DRAFT_01758 at 654.324 kb on + strand, within H281DRAFT_01758 at 654.325 kb on - strand, within H281DRAFT_01758 at 654.398 kb on + strand, within H281DRAFT_01758 at 654.464 kb on + strand, within H281DRAFT_01758 at 654.465 kb on - strand, within H281DRAFT_01758 at 654.972 kb on + strand, within H281DRAFT_01759 at 655.032 kb on - strand, within H281DRAFT_01759
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_10 remove 653,101 + H281DRAFT_01756 0.28 -1.1 653,101 + H281DRAFT_01756 0.28 -1.1 653,429 - H281DRAFT_01756 0.61 -1.0 653,475 + H281DRAFT_01756 0.66 -2.1 653,665 - H281DRAFT_01756 0.85 -3.1 654,264 + H281DRAFT_01758 0.17 +0.5 654,265 - H281DRAFT_01758 0.17 +0.3 654,265 - H281DRAFT_01758 0.17 -0.3 654,317 + H281DRAFT_01758 0.31 +0.3 654,318 - H281DRAFT_01758 0.31 -1.6 654,320 + H281DRAFT_01758 0.32 -0.2 654,321 - H281DRAFT_01758 0.32 -2.0 654,324 + H281DRAFT_01758 0.33 +0.4 654,325 - H281DRAFT_01758 0.33 -0.9 654,398 + H281DRAFT_01758 0.52 -0.2 654,464 + H281DRAFT_01758 0.69 -1.1 654,465 - H281DRAFT_01758 0.70 -1.4 654,972 + H281DRAFT_01759 0.45 -1.4 655,032 - H281DRAFT_01759 0.52 -2.7
Or see this region's nucleotide sequence