Experiment: Bu1_10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01557 and H281DRAFT_01558 are separated by 119 nucleotides H281DRAFT_01558 and H281DRAFT_01559 are separated by 23 nucleotides H281DRAFT_01559 and H281DRAFT_01560 are separated by 54 nucleotides
H281DRAFT_01557: H281DRAFT_01557 - transcriptional regulator, GntR family, at 429,285 to 430,697
_01557
H281DRAFT_01558: H281DRAFT_01558 - Cupin domain protein, at 430,817 to 431,233
_01558
H281DRAFT_01559: H281DRAFT_01559 - alkylhydroperoxidase AhpD family core domain-containing protein, at 431,257 to 431,712
_01559
H281DRAFT_01560: H281DRAFT_01560 - hypothetical protein, at 431,767 to 432,537
_01560
Position (kb) 430
431
432 Strain fitness (log2 ratio) -1
0
1 at 429.886 kb on + strand, within H281DRAFT_01557 at 430.131 kb on + strand, within H281DRAFT_01557 at 430.229 kb on + strand at 430.463 kb on - strand, within H281DRAFT_01557 at 430.514 kb on + strand, within H281DRAFT_01557 at 430.514 kb on + strand, within H281DRAFT_01557 at 430.515 kb on - strand, within H281DRAFT_01557 at 430.515 kb on - strand, within H281DRAFT_01557 at 430.526 kb on - strand, within H281DRAFT_01557 at 430.585 kb on - strand at 430.613 kb on - strand at 430.649 kb on - strand at 430.692 kb on - strand at 430.696 kb on - strand at 430.734 kb on + strand at 430.739 kb on - strand at 430.793 kb on - strand at 430.793 kb on - strand at 431.026 kb on + strand, within H281DRAFT_01558 at 431.027 kb on - strand, within H281DRAFT_01558 at 431.027 kb on - strand, within H281DRAFT_01558 at 431.027 kb on - strand at 431.030 kb on + strand, within H281DRAFT_01558 at 431.031 kb on - strand, within H281DRAFT_01558 at 431.036 kb on + strand, within H281DRAFT_01558 at 431.037 kb on - strand, within H281DRAFT_01558 at 431.037 kb on - strand, within H281DRAFT_01558 at 431.238 kb on + strand at 431.371 kb on + strand, within H281DRAFT_01559 at 431.421 kb on + strand, within H281DRAFT_01559 at 431.422 kb on - strand, within H281DRAFT_01559 at 431.422 kb on - strand, within H281DRAFT_01559 at 431.422 kb on - strand, within H281DRAFT_01559 at 431.581 kb on + strand, within H281DRAFT_01559 at 431.656 kb on + strand, within H281DRAFT_01559 at 431.657 kb on - strand, within H281DRAFT_01559 at 431.820 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_10 remove 429,886 + H281DRAFT_01557 0.43 +0.9 430,131 + H281DRAFT_01557 0.60 +0.3 430,229 + +0.3 430,463 - H281DRAFT_01557 0.83 -0.5 430,514 + H281DRAFT_01557 0.87 -0.6 430,514 + H281DRAFT_01557 0.87 -1.0 430,515 - H281DRAFT_01557 0.87 +0.2 430,515 - H281DRAFT_01557 0.87 +0.8 430,526 - H281DRAFT_01557 0.88 +0.5 430,585 - -0.3 430,613 - +0.8 430,649 - +0.9 430,692 - -0.0 430,696 - +1.3 430,734 + -0.4 430,739 - -0.1 430,793 - -1.2 430,793 - +0.3 431,026 + H281DRAFT_01558 0.50 +0.4 431,027 - H281DRAFT_01558 0.50 -0.1 431,027 - H281DRAFT_01558 0.50 -1.5 431,027 - +1.2 431,030 + H281DRAFT_01558 0.51 +0.4 431,031 - H281DRAFT_01558 0.51 -0.9 431,036 + H281DRAFT_01558 0.53 +0.1 431,037 - H281DRAFT_01558 0.53 +0.5 431,037 - H281DRAFT_01558 0.53 +0.3 431,238 + +1.2 431,371 + H281DRAFT_01559 0.25 -0.1 431,421 + H281DRAFT_01559 0.36 +0.5 431,422 - H281DRAFT_01559 0.36 -0.6 431,422 - H281DRAFT_01559 0.36 -0.4 431,422 - H281DRAFT_01559 0.36 -0.3 431,581 + H281DRAFT_01559 0.71 +0.4 431,656 + H281DRAFT_01559 0.88 +0.6 431,657 - H281DRAFT_01559 0.88 -0.1 431,820 + -1.1
Or see this region's nucleotide sequence