Experiment: Bu1_10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01315 and H281DRAFT_01316 are separated by 114 nucleotides H281DRAFT_01316 and H281DRAFT_01317 are separated by 109 nucleotides H281DRAFT_01317 and H281DRAFT_01318 are separated by 728 nucleotides
H281DRAFT_01315: H281DRAFT_01315 - probable Rubsico expression protein CbbX, at 155,249 to 156,337
_01315
H281DRAFT_01316: H281DRAFT_01316 - ribulose 1,5-bisphosphate carboxylase small subunit, at 156,452 to 156,880
_01316
H281DRAFT_01317: H281DRAFT_01317 - ribulose 1,5-bisphosphate carboxylase large subunit, at 156,990 to 158,489
_01317
H281DRAFT_01318: H281DRAFT_01318 - hypothetical protein, at 159,218 to 159,802
_01318
Position (kb) 156
157
158
159 Strain fitness (log2 ratio) -2
-1
0
1
2 at 156.053 kb on - strand, within H281DRAFT_01315 at 156.433 kb on + strand at 156.886 kb on - strand at 157.408 kb on + strand, within H281DRAFT_01317 at 157.543 kb on + strand, within H281DRAFT_01317 at 157.544 kb on - strand, within H281DRAFT_01317 at 157.690 kb on + strand, within H281DRAFT_01317 at 157.691 kb on - strand, within H281DRAFT_01317 at 157.726 kb on + strand, within H281DRAFT_01317 at 157.949 kb on - strand, within H281DRAFT_01317 at 158.023 kb on - strand, within H281DRAFT_01317 at 158.144 kb on - strand, within H281DRAFT_01317 at 158.380 kb on + strand at 158.495 kb on - strand at 158.599 kb on - strand at 158.918 kb on + strand at 158.919 kb on - strand at 159.018 kb on - strand at 159.018 kb on - strand at 159.043 kb on - strand at 159.100 kb on + strand at 159.100 kb on + strand at 159.116 kb on - strand at 159.242 kb on - strand at 159.346 kb on + strand, within H281DRAFT_01318 at 159.347 kb on - strand, within H281DRAFT_01318
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_10 remove 156,053 - H281DRAFT_01315 0.74 +0.3 156,433 + -0.8 156,886 - -0.8 157,408 + H281DRAFT_01317 0.28 +0.1 157,543 + H281DRAFT_01317 0.37 +1.9 157,544 - H281DRAFT_01317 0.37 +0.1 157,690 + H281DRAFT_01317 0.47 +0.8 157,691 - H281DRAFT_01317 0.47 +0.5 157,726 + H281DRAFT_01317 0.49 -0.1 157,949 - H281DRAFT_01317 0.64 -0.2 158,023 - H281DRAFT_01317 0.69 +1.0 158,144 - H281DRAFT_01317 0.77 +1.5 158,380 + +0.2 158,495 - +0.8 158,599 - -0.6 158,918 + +0.1 158,919 - -0.3 159,018 - +0.5 159,018 - +0.6 159,043 - -1.9 159,100 + -1.2 159,100 + +1.0 159,116 - -1.2 159,242 - -1.6 159,346 + H281DRAFT_01318 0.22 -1.4 159,347 - H281DRAFT_01318 0.22 +0.7
Or see this region's nucleotide sequence