Experiment: Bu1_10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00744 and H281DRAFT_00745 are separated by 174 nucleotides H281DRAFT_00745 and H281DRAFT_00746 are separated by 9 nucleotides H281DRAFT_00746 and H281DRAFT_00747 are separated by 285 nucleotides H281DRAFT_00747 and H281DRAFT_00748 are separated by 280 nucleotides
H281DRAFT_00744: H281DRAFT_00744 - arginine-tRNA-protein transferase, at 840,681 to 841,502
_00744
H281DRAFT_00745: H281DRAFT_00745 - leucyl/phenylalanyl-tRNA--protein transferase, at 841,677 to 842,414
_00745
H281DRAFT_00746: H281DRAFT_00746 - ADP-ribose pyrophosphatase YjhB, NUDIX family, at 842,424 to 842,969
_00746
H281DRAFT_00747: H281DRAFT_00747 - tRNA_Met_CAT, at 843,255 to 843,331
_00747
H281DRAFT_00748: H281DRAFT_00748 - Uncharacterized protein, UPF0303 family, at 843,612 to 844,154
_00748
Position (kb) 842
843 Strain fitness (log2 ratio) -1
0
1 at 841.836 kb on + strand, within H281DRAFT_00745 at 841.836 kb on + strand, within H281DRAFT_00745 at 841.837 kb on - strand, within H281DRAFT_00745 at 841.837 kb on - strand, within H281DRAFT_00745 at 841.837 kb on - strand, within H281DRAFT_00745 at 841.846 kb on - strand, within H281DRAFT_00745 at 841.958 kb on - strand, within H281DRAFT_00745 at 841.958 kb on - strand, within H281DRAFT_00745 at 842.043 kb on + strand, within H281DRAFT_00745 at 842.043 kb on + strand, within H281DRAFT_00745 at 842.043 kb on + strand, within H281DRAFT_00745 at 842.054 kb on + strand, within H281DRAFT_00745 at 842.287 kb on + strand, within H281DRAFT_00745 at 842.460 kb on - strand at 842.626 kb on + strand, within H281DRAFT_00746 at 842.626 kb on + strand at 842.683 kb on - strand, within H281DRAFT_00746 at 842.811 kb on + strand, within H281DRAFT_00746 at 842.811 kb on + strand, within H281DRAFT_00746 at 842.870 kb on - strand, within H281DRAFT_00746 at 842.895 kb on + strand, within H281DRAFT_00746 at 842.970 kb on - strand at 842.993 kb on + strand at 842.994 kb on - strand at 842.994 kb on - strand at 843.097 kb on - strand at 843.097 kb on - strand at 843.108 kb on - strand at 843.280 kb on + strand, within H281DRAFT_00747 at 843.281 kb on - strand, within H281DRAFT_00747 at 843.281 kb on - strand, within H281DRAFT_00747 at 843.295 kb on - strand, within H281DRAFT_00747 at 843.376 kb on + strand at 843.397 kb on - strand at 843.520 kb on - strand at 843.566 kb on + strand at 843.753 kb on + strand, within H281DRAFT_00748
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_10 remove 841,836 + H281DRAFT_00745 0.22 -0.3 841,836 + H281DRAFT_00745 0.22 -0.8 841,837 - H281DRAFT_00745 0.22 +0.4 841,837 - H281DRAFT_00745 0.22 +0.5 841,837 - H281DRAFT_00745 0.22 -0.3 841,846 - H281DRAFT_00745 0.23 +0.9 841,958 - H281DRAFT_00745 0.38 -0.0 841,958 - H281DRAFT_00745 0.38 +0.4 842,043 + H281DRAFT_00745 0.50 -0.1 842,043 + H281DRAFT_00745 0.50 -1.3 842,043 + H281DRAFT_00745 0.50 -0.4 842,054 + H281DRAFT_00745 0.51 -1.5 842,287 + H281DRAFT_00745 0.83 -1.0 842,460 - +1.1 842,626 + H281DRAFT_00746 0.37 +1.7 842,626 + +0.6 842,683 - H281DRAFT_00746 0.47 -0.3 842,811 + H281DRAFT_00746 0.71 +1.3 842,811 + H281DRAFT_00746 0.71 -0.2 842,870 - H281DRAFT_00746 0.82 +0.9 842,895 + H281DRAFT_00746 0.86 -0.4 842,970 - +0.7 842,993 + +1.2 842,994 - +0.5 842,994 - -0.1 843,097 - -1.1 843,097 - -0.0 843,108 - +0.4 843,280 + H281DRAFT_00747 0.32 -0.6 843,281 - H281DRAFT_00747 0.34 -1.1 843,281 - H281DRAFT_00747 0.34 -0.6 843,295 - H281DRAFT_00747 0.52 -1.3 843,376 + +0.6 843,397 - -1.5 843,520 - -0.0 843,566 + -0.3 843,753 + H281DRAFT_00748 0.26 -0.7
Or see this region's nucleotide sequence