Experiment: Bu1_10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00482 and H281DRAFT_00483 are separated by 157 nucleotides H281DRAFT_00483 and H281DRAFT_00484 are separated by 15 nucleotides H281DRAFT_00484 and H281DRAFT_00485 are separated by 97 nucleotides H281DRAFT_00485 and H281DRAFT_00486 are separated by 235 nucleotides
H281DRAFT_00482: H281DRAFT_00482 - molecular chaperone HscA, at 539,384 to 541,255
_00482
H281DRAFT_00483: H281DRAFT_00483 - ferredoxin, 2Fe-2S, at 541,413 to 541,754
_00483
H281DRAFT_00484: H281DRAFT_00484 - FeS assembly protein IscX, at 541,770 to 541,967
_00484
H281DRAFT_00485: H281DRAFT_00485 - Glycine zipper 2TM domain-containing protein, at 542,065 to 542,829
_00485
H281DRAFT_00486: H281DRAFT_00486 - lysyl-tRNA synthetase, class II, at 543,065 to 544,675
_00486
Position (kb) 542
543 Strain fitness (log2 ratio) -2
-1
0
1 at 541.753 kb on - strand at 541.753 kb on - strand at 541.963 kb on - strand at 542.135 kb on + strand at 542.183 kb on + strand, within H281DRAFT_00485 at 542.202 kb on + strand, within H281DRAFT_00485 at 542.430 kb on - strand, within H281DRAFT_00485 at 542.465 kb on + strand, within H281DRAFT_00485 at 542.860 kb on + strand at 542.860 kb on + strand at 542.861 kb on - strand at 542.861 kb on - strand at 542.862 kb on - strand at 542.909 kb on + strand at 542.960 kb on - strand at 542.969 kb on + strand at 542.970 kb on - strand at 543.060 kb on - strand at 543.060 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_10 remove 541,753 - +0.6 541,753 - -0.7 541,963 - -1.3 542,135 + -0.6 542,183 + H281DRAFT_00485 0.15 +0.5 542,202 + H281DRAFT_00485 0.18 -0.2 542,430 - H281DRAFT_00485 0.48 +1.4 542,465 + H281DRAFT_00485 0.52 +0.2 542,860 + -0.1 542,860 + -2.7 542,861 - -0.9 542,861 - -1.5 542,862 - -0.0 542,909 + -1.1 542,960 - +0.1 542,969 + -1.7 542,970 - +0.1 543,060 - +0.7 543,060 - -1.3
Or see this region's nucleotide sequence