Experiment: Bu1_10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00102 and H281DRAFT_00103 are separated by 348 nucleotides H281DRAFT_00103 and H281DRAFT_00104 are separated by 3 nucleotides
H281DRAFT_00102: H281DRAFT_00102 - protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 106,244 to 106,897
_00102
H281DRAFT_00103: H281DRAFT_00103 - transcriptional regulator, LacI family, at 107,246 to 108,334
_00103
H281DRAFT_00104: H281DRAFT_00104 - monosaccharide ABC transporter ATP-binding protein, CUT2 family, at 108,338 to 109,825
_00104
Position (kb) 107
108
109 Strain fitness (log2 ratio) -1
0
1
2 at 106.468 kb on - strand, within H281DRAFT_00102 at 106.630 kb on - strand, within H281DRAFT_00102 at 107.028 kb on - strand at 107.028 kb on - strand at 107.165 kb on - strand at 107.804 kb on + strand, within H281DRAFT_00103 at 107.804 kb on + strand, within H281DRAFT_00103 at 107.804 kb on + strand, within H281DRAFT_00103 at 107.804 kb on + strand, within H281DRAFT_00103 at 107.805 kb on - strand, within H281DRAFT_00103 at 107.904 kb on - strand, within H281DRAFT_00103 at 107.933 kb on + strand, within H281DRAFT_00103 at 107.934 kb on - strand, within H281DRAFT_00103 at 108.005 kb on + strand, within H281DRAFT_00103 at 108.006 kb on - strand, within H281DRAFT_00103 at 108.435 kb on - strand at 108.638 kb on + strand, within H281DRAFT_00104 at 108.639 kb on - strand, within H281DRAFT_00104 at 108.639 kb on - strand, within H281DRAFT_00104 at 108.921 kb on - strand, within H281DRAFT_00104 at 109.334 kb on + strand, within H281DRAFT_00104
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_10 remove 106,468 - H281DRAFT_00102 0.34 -0.2 106,630 - H281DRAFT_00102 0.59 +2.6 107,028 - +0.4 107,028 - +0.8 107,165 - +1.1 107,804 + H281DRAFT_00103 0.51 -0.2 107,804 + H281DRAFT_00103 0.51 -1.6 107,804 + H281DRAFT_00103 0.51 +1.0 107,804 + H281DRAFT_00103 0.51 -0.5 107,805 - H281DRAFT_00103 0.51 +0.3 107,904 - H281DRAFT_00103 0.60 +0.2 107,933 + H281DRAFT_00103 0.63 +0.8 107,934 - H281DRAFT_00103 0.63 -0.3 108,005 + H281DRAFT_00103 0.70 -1.0 108,006 - H281DRAFT_00103 0.70 +0.4 108,435 - -0.1 108,638 + H281DRAFT_00104 0.20 -0.2 108,639 - H281DRAFT_00104 0.20 -0.7 108,639 - H281DRAFT_00104 0.20 +0.3 108,921 - H281DRAFT_00104 0.39 -0.3 109,334 + H281DRAFT_00104 0.67 -1.3
Or see this region's nucleotide sequence