Experiment: KB with Physcion 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0158 and Psyr_0159 are separated by 45 nucleotides Psyr_0159 and Psyr_0160 are separated by 534 nucleotides
Psyr_0158: Psyr_0158 - FAD dependent oxidoreductase, at 172,214 to 173,509
_0158
Psyr_0159: Psyr_0159 - HAD-superfamily hydrolase, subfamily IA, variant 2, at 173,555 to 174,223
_0159
Psyr_0160: Psyr_0160 - GCN5-related N-acetyltransferase, at 174,758 to 175,615
_0160
Position (kb) 173
174
175 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 172.632 kb on + strand, within Psyr_0158 at 172.632 kb on + strand, within Psyr_0158 at 172.632 kb on + strand, within Psyr_0158 at 172.633 kb on - strand, within Psyr_0158 at 172.633 kb on - strand, within Psyr_0158 at 172.633 kb on - strand, within Psyr_0158 at 172.633 kb on - strand, within Psyr_0158 at 172.659 kb on + strand, within Psyr_0158 at 172.659 kb on + strand, within Psyr_0158 at 172.659 kb on + strand, within Psyr_0158 at 172.659 kb on + strand, within Psyr_0158 at 172.660 kb on - strand, within Psyr_0158 at 172.660 kb on - strand, within Psyr_0158 at 172.660 kb on - strand, within Psyr_0158 at 172.660 kb on - strand, within Psyr_0158 at 172.887 kb on + strand, within Psyr_0158 at 172.887 kb on + strand, within Psyr_0158 at 172.887 kb on + strand, within Psyr_0158 at 172.888 kb on - strand, within Psyr_0158 at 172.888 kb on - strand, within Psyr_0158 at 172.956 kb on - strand, within Psyr_0158 at 173.092 kb on - strand, within Psyr_0158 at 173.196 kb on + strand, within Psyr_0158 at 173.205 kb on + strand, within Psyr_0158 at 173.205 kb on + strand, within Psyr_0158 at 173.205 kb on + strand, within Psyr_0158 at 173.205 kb on + strand, within Psyr_0158 at 173.205 kb on + strand, within Psyr_0158 at 173.205 kb on + strand, within Psyr_0158 at 173.205 kb on + strand, within Psyr_0158 at 173.205 kb on + strand, within Psyr_0158 at 173.205 kb on + strand, within Psyr_0158 at 173.205 kb on + strand, within Psyr_0158 at 173.205 kb on + strand, within Psyr_0158 at 173.205 kb on + strand, within Psyr_0158 at 173.206 kb on - strand, within Psyr_0158 at 173.206 kb on - strand, within Psyr_0158 at 173.206 kb on - strand, within Psyr_0158 at 173.206 kb on - strand, within Psyr_0158 at 173.206 kb on - strand, within Psyr_0158 at 173.206 kb on - strand, within Psyr_0158 at 173.253 kb on + strand, within Psyr_0158 at 173.253 kb on + strand, within Psyr_0158 at 173.253 kb on + strand, within Psyr_0158 at 173.253 kb on + strand, within Psyr_0158 at 173.253 kb on + strand, within Psyr_0158 at 173.253 kb on + strand, within Psyr_0158 at 173.254 kb on - strand, within Psyr_0158 at 173.254 kb on - strand, within Psyr_0158 at 173.254 kb on - strand, within Psyr_0158 at 173.273 kb on - strand, within Psyr_0158 at 173.472 kb on + strand at 173.473 kb on - strand at 173.556 kb on + strand at 173.782 kb on + strand, within Psyr_0159 at 173.782 kb on + strand, within Psyr_0159 at 173.784 kb on + strand, within Psyr_0159 at 173.784 kb on + strand, within Psyr_0159 at 173.784 kb on + strand, within Psyr_0159 at 173.785 kb on - strand, within Psyr_0159 at 173.785 kb on - strand, within Psyr_0159 at 173.961 kb on + strand, within Psyr_0159 at 173.962 kb on - strand, within Psyr_0159 at 173.964 kb on + strand, within Psyr_0159 at 173.964 kb on + strand, within Psyr_0159 at 173.964 kb on + strand, within Psyr_0159 at 173.964 kb on + strand, within Psyr_0159 at 173.964 kb on + strand, within Psyr_0159 at 173.964 kb on + strand, within Psyr_0159 at 173.964 kb on + strand, within Psyr_0159 at 173.964 kb on + strand, within Psyr_0159 at 173.964 kb on + strand, within Psyr_0159 at 173.964 kb on + strand, within Psyr_0159 at 173.965 kb on - strand, within Psyr_0159 at 173.965 kb on - strand, within Psyr_0159 at 173.965 kb on - strand, within Psyr_0159 at 173.965 kb on - strand, within Psyr_0159 at 173.965 kb on - strand, within Psyr_0159 at 173.965 kb on - strand, within Psyr_0159 at 173.965 kb on - strand, within Psyr_0159 at 173.965 kb on - strand, within Psyr_0159 at 174.042 kb on + strand, within Psyr_0159 at 174.043 kb on - strand, within Psyr_0159 at 174.078 kb on + strand, within Psyr_0159 at 174.079 kb on - strand, within Psyr_0159 at 174.183 kb on + strand at 174.196 kb on + strand at 174.197 kb on - strand at 174.197 kb on - strand at 174.319 kb on + strand at 174.319 kb on + strand at 174.320 kb on - strand at 174.320 kb on - strand at 174.320 kb on - strand at 174.348 kb on + strand at 174.349 kb on - strand at 174.452 kb on - strand at 174.547 kb on + strand at 174.547 kb on + strand at 174.547 kb on + strand at 174.547 kb on + strand at 174.547 kb on + strand at 174.547 kb on + strand at 174.547 kb on + strand at 174.547 kb on + strand at 174.547 kb on + strand at 174.547 kb on + strand at 174.547 kb on + strand at 174.548 kb on - strand at 174.548 kb on - strand at 174.548 kb on - strand at 174.548 kb on - strand at 174.548 kb on - strand at 174.548 kb on - strand at 174.548 kb on - strand at 174.548 kb on - strand at 174.548 kb on - strand at 174.549 kb on + strand at 174.549 kb on + strand at 174.549 kb on + strand at 174.549 kb on + strand at 174.549 kb on + strand at 174.550 kb on - strand at 174.550 kb on - strand at 174.550 kb on - strand at 174.550 kb on - strand at 174.550 kb on - strand at 174.551 kb on + strand at 174.551 kb on + strand at 174.551 kb on + strand at 174.551 kb on + strand at 174.551 kb on + strand at 174.551 kb on + strand at 174.551 kb on + strand at 174.551 kb on + strand at 174.551 kb on + strand at 174.551 kb on + strand at 174.551 kb on + strand at 174.551 kb on + strand at 174.552 kb on - strand at 174.552 kb on - strand at 174.552 kb on - strand at 174.552 kb on - strand at 174.552 kb on - strand at 174.552 kb on - strand at 174.552 kb on - strand at 174.552 kb on - strand at 174.611 kb on + strand at 174.611 kb on + strand at 174.611 kb on + strand at 174.618 kb on + strand at 174.618 kb on + strand at 174.619 kb on - strand at 174.619 kb on - strand at 174.699 kb on + strand at 174.699 kb on + strand at 174.699 kb on + strand at 174.699 kb on + strand at 174.700 kb on - strand at 174.700 kb on - strand at 174.700 kb on - strand at 174.700 kb on - strand at 174.723 kb on + strand at 174.723 kb on + strand at 174.724 kb on - strand at 174.831 kb on + strand at 174.831 kb on + strand at 175.182 kb on + strand, within Psyr_0160 at 175.182 kb on + strand, within Psyr_0160 at 175.183 kb on - strand, within Psyr_0160
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Physcion 10 mM remove 172,632 + Psyr_0158 0.32 -0.7 172,632 + Psyr_0158 0.32 -0.3 172,632 + Psyr_0158 0.32 +1.0 172,633 - Psyr_0158 0.32 -0.9 172,633 - Psyr_0158 0.32 +0.0 172,633 - Psyr_0158 0.32 +0.2 172,633 - Psyr_0158 0.32 -0.5 172,659 + Psyr_0158 0.34 +0.6 172,659 + Psyr_0158 0.34 -1.0 172,659 + Psyr_0158 0.34 -1.7 172,659 + Psyr_0158 0.34 -0.4 172,660 - Psyr_0158 0.34 -0.1 172,660 - Psyr_0158 0.34 +0.3 172,660 - Psyr_0158 0.34 -1.5 172,660 - Psyr_0158 0.34 -1.9 172,887 + Psyr_0158 0.52 -0.2 172,887 + Psyr_0158 0.52 +1.5 172,887 + Psyr_0158 0.52 +1.0 172,888 - Psyr_0158 0.52 -0.4 172,888 - Psyr_0158 0.52 +2.8 172,956 - Psyr_0158 0.57 -1.0 173,092 - Psyr_0158 0.68 -0.1 173,196 + Psyr_0158 0.76 -1.6 173,205 + Psyr_0158 0.76 -1.2 173,205 + Psyr_0158 0.76 +0.5 173,205 + Psyr_0158 0.76 +0.2 173,205 + Psyr_0158 0.76 +0.3 173,205 + Psyr_0158 0.76 -0.1 173,205 + Psyr_0158 0.76 -0.9 173,205 + Psyr_0158 0.76 +0.1 173,205 + Psyr_0158 0.76 +0.9 173,205 + Psyr_0158 0.76 -1.1 173,205 + Psyr_0158 0.76 -0.5 173,205 + Psyr_0158 0.76 -0.9 173,205 + Psyr_0158 0.76 +0.2 173,206 - Psyr_0158 0.77 +0.4 173,206 - Psyr_0158 0.77 -0.4 173,206 - Psyr_0158 0.77 +0.6 173,206 - Psyr_0158 0.77 -0.6 173,206 - Psyr_0158 0.77 -0.7 173,206 - Psyr_0158 0.77 -0.1 173,253 + Psyr_0158 0.80 -0.4 173,253 + Psyr_0158 0.80 +0.8 173,253 + Psyr_0158 0.80 +0.3 173,253 + Psyr_0158 0.80 +1.1 173,253 + Psyr_0158 0.80 +0.8 173,253 + Psyr_0158 0.80 +1.0 173,254 - Psyr_0158 0.80 -0.8 173,254 - Psyr_0158 0.80 +0.1 173,254 - Psyr_0158 0.80 -1.2 173,273 - Psyr_0158 0.82 -0.5 173,472 + -0.6 173,473 - -0.7 173,556 + +0.5 173,782 + Psyr_0159 0.34 +1.2 173,782 + Psyr_0159 0.34 -0.6 173,784 + Psyr_0159 0.34 +2.4 173,784 + Psyr_0159 0.34 +0.1 173,784 + Psyr_0159 0.34 +0.7 173,785 - Psyr_0159 0.34 +2.8 173,785 - Psyr_0159 0.34 -2.1 173,961 + Psyr_0159 0.61 +1.1 173,962 - Psyr_0159 0.61 +1.8 173,964 + Psyr_0159 0.61 -0.6 173,964 + Psyr_0159 0.61 +2.0 173,964 + Psyr_0159 0.61 -0.2 173,964 + Psyr_0159 0.61 -0.4 173,964 + Psyr_0159 0.61 -1.4 173,964 + Psyr_0159 0.61 -0.4 173,964 + Psyr_0159 0.61 +1.2 173,964 + Psyr_0159 0.61 +2.4 173,964 + Psyr_0159 0.61 -0.4 173,964 + Psyr_0159 0.61 -0.1 173,965 - Psyr_0159 0.61 +0.1 173,965 - Psyr_0159 0.61 +2.0 173,965 - Psyr_0159 0.61 -2.4 173,965 - Psyr_0159 0.61 +0.0 173,965 - Psyr_0159 0.61 +0.2 173,965 - Psyr_0159 0.61 +1.9 173,965 - Psyr_0159 0.61 +0.1 173,965 - Psyr_0159 0.61 -2.1 174,042 + Psyr_0159 0.73 +0.1 174,043 - Psyr_0159 0.73 -0.4 174,078 + Psyr_0159 0.78 +1.2 174,079 - Psyr_0159 0.78 -0.0 174,183 + -0.4 174,196 + +0.4 174,197 - +0.5 174,197 - +1.5 174,319 + +1.9 174,319 + -0.2 174,320 - +0.7 174,320 - +0.7 174,320 - -1.4 174,348 + +0.7 174,349 - +0.2 174,452 - -0.9 174,547 + -1.2 174,547 + +0.5 174,547 + +0.6 174,547 + -1.3 174,547 + -0.4 174,547 + -1.6 174,547 + +0.9 174,547 + -0.1 174,547 + +0.4 174,547 + -0.1 174,547 + +0.3 174,548 - +0.2 174,548 - -1.5 174,548 - +0.5 174,548 - -0.4 174,548 - -0.2 174,548 - +0.2 174,548 - -1.2 174,548 - +1.4 174,548 - -0.5 174,549 + -0.2 174,549 + +0.0 174,549 + +0.7 174,549 + +1.3 174,549 + -0.4 174,550 - +1.9 174,550 - +0.3 174,550 - +0.6 174,550 - +0.8 174,550 - +1.9 174,551 + -0.1 174,551 + -0.5 174,551 + -0.5 174,551 + +2.2 174,551 + -1.4 174,551 + -1.4 174,551 + +0.6 174,551 + -0.1 174,551 + +0.4 174,551 + +0.6 174,551 + -0.3 174,551 + -0.8 174,552 - +3.5 174,552 - -0.7 174,552 - +0.0 174,552 - +1.2 174,552 - -0.2 174,552 - +0.7 174,552 - -1.5 174,552 - -0.1 174,611 + -0.7 174,611 + -0.8 174,611 + +2.2 174,618 + -0.8 174,618 + +0.6 174,619 - +0.1 174,619 - -0.1 174,699 + +0.1 174,699 + +0.0 174,699 + +0.1 174,699 + +1.6 174,700 - +0.1 174,700 - -0.1 174,700 - +0.1 174,700 - -0.3 174,723 + +1.6 174,723 + -0.5 174,724 - +0.7 174,831 + +0.3 174,831 + +1.3 175,182 + Psyr_0160 0.49 -0.8 175,182 + Psyr_0160 0.49 +2.2 175,183 - Psyr_0160 0.50 +0.0
Or see this region's nucleotide sequence