Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06370 and H281DRAFT_06371 are separated by 63 nucleotides H281DRAFT_06371 and H281DRAFT_06372 are separated by 59 nucleotides H281DRAFT_06372 and H281DRAFT_06373 are separated by 252 nucleotides H281DRAFT_06373 and H281DRAFT_06374 are separated by 129 nucleotides
H281DRAFT_06370: H281DRAFT_06370 - tight adherence protein C, at 42,810 to 43,766
_06370
H281DRAFT_06371: H281DRAFT_06371 - TadE-like protein, at 43,830 to 44,306
_06371
H281DRAFT_06372: H281DRAFT_06372 - TadE-like protein, at 44,366 to 45,418
_06372
H281DRAFT_06373: H281DRAFT_06373 - Protein of unknown function (DUF3005), at 45,671 to 46,252
_06373
H281DRAFT_06374: H281DRAFT_06374 - ATP-binding cassette, subfamily B, at 46,382 to 48,211
_06374
Position (kb) 44
45
46 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 44.052 kb on + strand, within H281DRAFT_06371 at 44.053 kb on - strand, within H281DRAFT_06371 at 44.104 kb on - strand, within H281DRAFT_06371 at 44.116 kb on - strand, within H281DRAFT_06371 at 44.214 kb on + strand, within H281DRAFT_06371 at 44.215 kb on - strand, within H281DRAFT_06371 at 44.215 kb on - strand, within H281DRAFT_06371 at 44.298 kb on + strand at 44.567 kb on + strand, within H281DRAFT_06372 at 44.567 kb on + strand, within H281DRAFT_06372 at 44.568 kb on - strand, within H281DRAFT_06372 at 44.764 kb on - strand, within H281DRAFT_06372 at 45.003 kb on + strand, within H281DRAFT_06372 at 45.015 kb on - strand, within H281DRAFT_06372 at 45.317 kb on + strand at 45.417 kb on - strand at 45.510 kb on - strand at 45.740 kb on - strand, within H281DRAFT_06373 at 45.805 kb on + strand, within H281DRAFT_06373 at 46.092 kb on + strand, within H281DRAFT_06373 at 46.169 kb on + strand, within H281DRAFT_06373 at 46.169 kb on + strand, within H281DRAFT_06373 at 46.169 kb on + strand, within H281DRAFT_06373 at 46.169 kb on + strand, within H281DRAFT_06373 at 46.251 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 44,052 + H281DRAFT_06371 0.47 -0.0 44,053 - H281DRAFT_06371 0.47 -0.5 44,104 - H281DRAFT_06371 0.57 +1.6 44,116 - H281DRAFT_06371 0.60 -1.5 44,214 + H281DRAFT_06371 0.81 +0.2 44,215 - H281DRAFT_06371 0.81 +0.5 44,215 - H281DRAFT_06371 0.81 -0.1 44,298 + -0.3 44,567 + H281DRAFT_06372 0.19 -2.8 44,567 + H281DRAFT_06372 0.19 -1.7 44,568 - H281DRAFT_06372 0.19 -1.1 44,764 - H281DRAFT_06372 0.38 -0.8 45,003 + H281DRAFT_06372 0.60 -2.6 45,015 - H281DRAFT_06372 0.62 -1.5 45,317 + -0.8 45,417 - +1.6 45,510 - -0.1 45,740 - H281DRAFT_06373 0.12 +0.5 45,805 + H281DRAFT_06373 0.23 +0.5 46,092 + H281DRAFT_06373 0.72 +0.2 46,169 + H281DRAFT_06373 0.86 -0.1 46,169 + H281DRAFT_06373 0.86 -0.6 46,169 + H281DRAFT_06373 0.86 +0.3 46,169 + H281DRAFT_06373 0.86 -1.6 46,251 - +1.6
Or see this region's nucleotide sequence