Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_06240

Experiment: Bu1_100

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntH281DRAFT_06239 and H281DRAFT_06240 overlap by 4 nucleotidesH281DRAFT_06240 and H281DRAFT_06241 are separated by 1 nucleotides H281DRAFT_06239: H281DRAFT_06239 - UDP-N-acetylglucosamine-N-acetylmuramylpentapeptide N-acetylglucosamine transferase, at 19,188 to 20,306 _06239 H281DRAFT_06240: H281DRAFT_06240 - UDP-N-acetylmuramate--L-alanine ligase, at 20,303 to 21,706 _06240 H281DRAFT_06241: H281DRAFT_06241 - D-alanine--D-alanine ligase, at 21,708 to 22,661 _06241 Position (kb) 20 21 22Strain fitness (log2 ratio) -1 0 1at 22.684 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Bu1_100
remove
22,684 + -0.5

Or see this region's nucleotide sequence