Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06230 and H281DRAFT_06231 overlap by 4 nucleotides H281DRAFT_06231 and H281DRAFT_06232 overlap by 4 nucleotides H281DRAFT_06232 and H281DRAFT_06233 overlap by 4 nucleotides
H281DRAFT_06230: H281DRAFT_06230 - 16S rRNA (cytosine1402-N4)-methyltransferase, at 8,934 to 9,875
_06230
H281DRAFT_06231: H281DRAFT_06231 - cell division protein FtsL, at 9,872 to 10,222
_06231
H281DRAFT_06232: H281DRAFT_06232 - peptidoglycan synthetase FtsI, at 10,219 to 12,084
_06232
H281DRAFT_06233: H281DRAFT_06233 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase, at 12,081 to 13,652
_06233
Position (kb) 10
11
12
13 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7
8 at 9.385 kb on + strand, within H281DRAFT_06230 at 10.287 kb on + strand at 10.384 kb on + strand at 10.624 kb on + strand, within H281DRAFT_06232 at 10.939 kb on + strand, within H281DRAFT_06232 at 11.056 kb on + strand, within H281DRAFT_06232 at 11.205 kb on + strand, within H281DRAFT_06232 at 11.359 kb on + strand, within H281DRAFT_06232 at 11.722 kb on + strand, within H281DRAFT_06232 at 11.722 kb on + strand, within H281DRAFT_06232 at 11.722 kb on + strand, within H281DRAFT_06232 at 11.724 kb on + strand, within H281DRAFT_06232 at 11.724 kb on + strand, within H281DRAFT_06232
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 9,385 + H281DRAFT_06230 0.48 +8.4 10,287 + -1.9 10,384 + -2.8 10,624 + H281DRAFT_06232 0.22 -0.7 10,939 + H281DRAFT_06232 0.39 -1.9 11,056 + H281DRAFT_06232 0.45 -1.8 11,205 + H281DRAFT_06232 0.53 +0.1 11,359 + H281DRAFT_06232 0.61 -1.5 11,722 + H281DRAFT_06232 0.81 -1.0 11,722 + H281DRAFT_06232 0.81 -2.5 11,722 + H281DRAFT_06232 0.81 +0.0 11,724 + H281DRAFT_06232 0.81 -1.1 11,724 + H281DRAFT_06232 0.81 -0.8
Or see this region's nucleotide sequence