Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06208 and H281DRAFT_06209 are separated by 40 nucleotides H281DRAFT_06209 and H281DRAFT_06210 overlap by 4 nucleotides
H281DRAFT_06208: H281DRAFT_06208 - Sugar phosphate permease, at 100,578 to 101,780
_06208
H281DRAFT_06209: H281DRAFT_06209 - carboxyvinyl-carboxyphosphonate phosphorylmutase, at 101,821 to 102,693
_06209
H281DRAFT_06210: H281DRAFT_06210 - aconitate hydratase, at 102,690 to 105,386
_06210
Position (kb) 101
102
103 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 100.823 kb on - strand, within H281DRAFT_06208 at 100.840 kb on + strand, within H281DRAFT_06208 at 100.898 kb on + strand, within H281DRAFT_06208 at 100.898 kb on + strand, within H281DRAFT_06208 at 100.898 kb on + strand, within H281DRAFT_06208 at 100.899 kb on - strand, within H281DRAFT_06208 at 100.900 kb on + strand, within H281DRAFT_06208 at 100.908 kb on - strand, within H281DRAFT_06208 at 100.908 kb on - strand, within H281DRAFT_06208 at 100.909 kb on + strand, within H281DRAFT_06208 at 100.910 kb on - strand, within H281DRAFT_06208 at 100.910 kb on - strand, within H281DRAFT_06208 at 100.929 kb on + strand, within H281DRAFT_06208 at 100.929 kb on + strand, within H281DRAFT_06208 at 100.930 kb on - strand, within H281DRAFT_06208 at 100.933 kb on + strand, within H281DRAFT_06208 at 101.021 kb on + strand, within H281DRAFT_06208 at 101.022 kb on - strand, within H281DRAFT_06208 at 101.023 kb on + strand, within H281DRAFT_06208 at 101.024 kb on - strand, within H281DRAFT_06208 at 101.253 kb on + strand, within H281DRAFT_06208 at 101.265 kb on + strand, within H281DRAFT_06208 at 101.643 kb on + strand, within H281DRAFT_06208 at 101.713 kb on - strand at 101.775 kb on - strand at 101.855 kb on + strand at 101.856 kb on - strand at 101.920 kb on + strand, within H281DRAFT_06209 at 101.920 kb on + strand, within H281DRAFT_06209 at 101.921 kb on - strand, within H281DRAFT_06209 at 101.970 kb on + strand, within H281DRAFT_06209 at 101.970 kb on + strand, within H281DRAFT_06209 at 101.971 kb on - strand, within H281DRAFT_06209 at 101.971 kb on - strand, within H281DRAFT_06209 at 102.041 kb on - strand, within H281DRAFT_06209 at 102.298 kb on + strand, within H281DRAFT_06209 at 102.453 kb on + strand, within H281DRAFT_06209 at 102.454 kb on - strand, within H281DRAFT_06209 at 102.454 kb on - strand, within H281DRAFT_06209 at 102.484 kb on - strand, within H281DRAFT_06209 at 102.540 kb on - strand, within H281DRAFT_06209 at 102.540 kb on - strand, within H281DRAFT_06209 at 102.543 kb on + strand, within H281DRAFT_06209 at 102.750 kb on + strand at 103.397 kb on + strand, within H281DRAFT_06210 at 103.397 kb on + strand, within H281DRAFT_06210 at 103.397 kb on + strand at 103.398 kb on - strand, within H281DRAFT_06210 at 103.398 kb on - strand, within H281DRAFT_06210 at 103.398 kb on - strand, within H281DRAFT_06210 at 103.398 kb on - strand, within H281DRAFT_06210 at 103.427 kb on + strand, within H281DRAFT_06210 at 103.428 kb on - strand, within H281DRAFT_06210 at 103.451 kb on + strand, within H281DRAFT_06210 at 103.452 kb on - strand, within H281DRAFT_06210 at 103.455 kb on - strand, within H281DRAFT_06210 at 103.513 kb on + strand, within H281DRAFT_06210 at 103.600 kb on + strand, within H281DRAFT_06210 at 103.601 kb on - strand, within H281DRAFT_06210 at 103.601 kb on - strand, within H281DRAFT_06210 at 103.601 kb on - strand, within H281DRAFT_06210
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 100,823 - H281DRAFT_06208 0.20 -0.8 100,840 + H281DRAFT_06208 0.22 +1.2 100,898 + H281DRAFT_06208 0.27 +0.2 100,898 + H281DRAFT_06208 0.27 +0.9 100,898 + H281DRAFT_06208 0.27 +0.2 100,899 - H281DRAFT_06208 0.27 -0.2 100,900 + H281DRAFT_06208 0.27 -0.0 100,908 - H281DRAFT_06208 0.27 -1.0 100,908 - H281DRAFT_06208 0.27 +0.4 100,909 + H281DRAFT_06208 0.28 -2.8 100,910 - H281DRAFT_06208 0.28 +0.6 100,910 - H281DRAFT_06208 0.28 -0.8 100,929 + H281DRAFT_06208 0.29 +0.6 100,929 + H281DRAFT_06208 0.29 +0.2 100,930 - H281DRAFT_06208 0.29 -0.5 100,933 + H281DRAFT_06208 0.30 +0.4 101,021 + H281DRAFT_06208 0.37 -0.7 101,022 - H281DRAFT_06208 0.37 -1.1 101,023 + H281DRAFT_06208 0.37 -3.4 101,024 - H281DRAFT_06208 0.37 -1.6 101,253 + H281DRAFT_06208 0.56 -0.0 101,265 + H281DRAFT_06208 0.57 +0.4 101,643 + H281DRAFT_06208 0.89 -0.3 101,713 - +1.5 101,775 - -0.6 101,855 + +0.3 101,856 - +0.5 101,920 + H281DRAFT_06209 0.11 +0.7 101,920 + H281DRAFT_06209 0.11 -1.1 101,921 - H281DRAFT_06209 0.11 -0.5 101,970 + H281DRAFT_06209 0.17 -0.2 101,970 + H281DRAFT_06209 0.17 -0.1 101,971 - H281DRAFT_06209 0.17 +0.1 101,971 - H281DRAFT_06209 0.17 +0.3 102,041 - H281DRAFT_06209 0.25 -0.1 102,298 + H281DRAFT_06209 0.55 +0.9 102,453 + H281DRAFT_06209 0.72 +0.6 102,454 - H281DRAFT_06209 0.73 +0.4 102,454 - H281DRAFT_06209 0.73 -0.0 102,484 - H281DRAFT_06209 0.76 +0.7 102,540 - H281DRAFT_06209 0.82 -0.9 102,540 - H281DRAFT_06209 0.82 -0.3 102,543 + H281DRAFT_06209 0.83 +1.0 102,750 + +0.9 103,397 + H281DRAFT_06210 0.26 +0.1 103,397 + H281DRAFT_06210 0.26 +0.5 103,397 + -1.1 103,398 - H281DRAFT_06210 0.26 +1.0 103,398 - H281DRAFT_06210 0.26 +0.2 103,398 - H281DRAFT_06210 0.26 -0.1 103,398 - H281DRAFT_06210 0.26 -1.9 103,427 + H281DRAFT_06210 0.27 +0.1 103,428 - H281DRAFT_06210 0.27 -0.6 103,451 + H281DRAFT_06210 0.28 +0.5 103,452 - H281DRAFT_06210 0.28 +0.8 103,455 - H281DRAFT_06210 0.28 +0.1 103,513 + H281DRAFT_06210 0.31 +0.4 103,600 + H281DRAFT_06210 0.34 -0.1 103,601 - H281DRAFT_06210 0.34 -0.1 103,601 - H281DRAFT_06210 0.34 +0.6 103,601 - H281DRAFT_06210 0.34 +0.9
Or see this region's nucleotide sequence