Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05352 and H281DRAFT_05353 are separated by 2 nucleotides H281DRAFT_05353 and H281DRAFT_05354 are separated by 256 nucleotides H281DRAFT_05354 and H281DRAFT_05355 are separated by 48 nucleotides H281DRAFT_05355 and H281DRAFT_05356 are separated by 153 nucleotides
H281DRAFT_05352: H281DRAFT_05352 - serine/threonine-protein kinase HipA, at 105,012 to 106,352
_05352
H281DRAFT_05353: H281DRAFT_05353 - HTH-type transcriptional regulator / antitoxin HipB, at 106,355 to 106,609
_05353
H281DRAFT_05354: H281DRAFT_05354 - Glycine/D-amino acid oxidase (deaminating), at 106,866 to 108,206
_05354
H281DRAFT_05355: H281DRAFT_05355 - Peptidase_C39 like family protein, at 108,255 to 108,887
_05355
H281DRAFT_05356: H281DRAFT_05356 - hypothetical protein, at 109,041 to 109,304
_05356
Position (kb) 106
107
108
109 Strain fitness (log2 ratio) -2
-1
0
1
2 at 105.990 kb on + strand, within H281DRAFT_05352 at 106.151 kb on - strand, within H281DRAFT_05352 at 106.252 kb on + strand at 106.412 kb on + strand, within H281DRAFT_05353 at 106.696 kb on - strand at 106.838 kb on + strand at 106.839 kb on - strand at 106.850 kb on + strand at 106.980 kb on + strand at 106.981 kb on - strand at 106.981 kb on - strand at 106.981 kb on - strand at 106.981 kb on - strand at 107.116 kb on + strand, within H281DRAFT_05354 at 107.116 kb on + strand, within H281DRAFT_05354 at 107.184 kb on + strand, within H281DRAFT_05354 at 107.185 kb on - strand, within H281DRAFT_05354 at 107.185 kb on - strand, within H281DRAFT_05354 at 107.265 kb on - strand, within H281DRAFT_05354 at 107.332 kb on - strand, within H281DRAFT_05354 at 107.410 kb on + strand, within H281DRAFT_05354 at 107.888 kb on + strand, within H281DRAFT_05354 at 107.888 kb on + strand, within H281DRAFT_05354 at 108.087 kb on - strand at 108.204 kb on + strand at 108.204 kb on + strand at 108.204 kb on + strand at 108.204 kb on + strand at 108.205 kb on - strand at 108.205 kb on - strand at 108.205 kb on - strand at 108.205 kb on - strand at 108.329 kb on + strand, within H281DRAFT_05355 at 108.460 kb on - strand, within H281DRAFT_05355 at 108.557 kb on + strand, within H281DRAFT_05355 at 108.557 kb on + strand, within H281DRAFT_05355 at 108.558 kb on - strand, within H281DRAFT_05355 at 108.558 kb on - strand, within H281DRAFT_05355 at 108.558 kb on - strand, within H281DRAFT_05355 at 108.558 kb on - strand, within H281DRAFT_05355 at 108.562 kb on - strand, within H281DRAFT_05355 at 108.816 kb on + strand, within H281DRAFT_05355 at 108.816 kb on + strand, within H281DRAFT_05355 at 108.816 kb on + strand, within H281DRAFT_05355 at 108.846 kb on + strand at 108.846 kb on + strand at 108.869 kb on + strand at 108.870 kb on - strand at 109.040 kb on + strand at 109.094 kb on + strand, within H281DRAFT_05356 at 109.178 kb on + strand, within H281DRAFT_05356 at 109.179 kb on - strand, within H281DRAFT_05356
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 105,990 + H281DRAFT_05352 0.73 +0.1 106,151 - H281DRAFT_05352 0.85 -0.2 106,252 + -0.2 106,412 + H281DRAFT_05353 0.22 -1.3 106,696 - -0.6 106,838 + +1.2 106,839 - +1.9 106,850 + -0.6 106,980 + -0.6 106,981 - -1.2 106,981 - -0.5 106,981 - -0.7 106,981 - +0.1 107,116 + H281DRAFT_05354 0.19 -0.0 107,116 + H281DRAFT_05354 0.19 +1.0 107,184 + H281DRAFT_05354 0.24 +0.8 107,185 - H281DRAFT_05354 0.24 -0.7 107,185 - H281DRAFT_05354 0.24 -1.1 107,265 - H281DRAFT_05354 0.30 +0.5 107,332 - H281DRAFT_05354 0.35 -2.3 107,410 + H281DRAFT_05354 0.41 +0.1 107,888 + H281DRAFT_05354 0.76 +0.0 107,888 + H281DRAFT_05354 0.76 -0.6 108,087 - +0.9 108,204 + -0.0 108,204 + -1.1 108,204 + -0.3 108,204 + +0.5 108,205 - +0.5 108,205 - -0.6 108,205 - -2.5 108,205 - +0.5 108,329 + H281DRAFT_05355 0.12 -0.5 108,460 - H281DRAFT_05355 0.32 +0.3 108,557 + H281DRAFT_05355 0.48 +0.3 108,557 + H281DRAFT_05355 0.48 -1.8 108,558 - H281DRAFT_05355 0.48 -0.9 108,558 - H281DRAFT_05355 0.48 +0.8 108,558 - H281DRAFT_05355 0.48 +0.4 108,558 - H281DRAFT_05355 0.48 -0.4 108,562 - H281DRAFT_05355 0.48 -0.3 108,816 + H281DRAFT_05355 0.89 -0.2 108,816 + H281DRAFT_05355 0.89 +0.1 108,816 + H281DRAFT_05355 0.89 -0.4 108,846 + +1.1 108,846 + -0.3 108,869 + +0.3 108,870 - -0.2 109,040 + +0.9 109,094 + H281DRAFT_05356 0.20 -0.0 109,178 + H281DRAFT_05356 0.52 +0.5 109,179 - H281DRAFT_05356 0.52 -1.1
Or see this region's nucleotide sequence