Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05193 and H281DRAFT_05194 are separated by 313 nucleotides H281DRAFT_05194 and H281DRAFT_05195 are separated by 273 nucleotides
H281DRAFT_05193: H281DRAFT_05193 - hypothetical protein, at 150,085 to 150,717
_05193
H281DRAFT_05194: H281DRAFT_05194 - penicillin-binding protein 1A, at 151,031 to 153,694
_05194
H281DRAFT_05195: H281DRAFT_05195 - KDO2-lipid IV(A) lauroyltransferase, at 153,968 to 154,933
_05195
Position (kb) 151
152
153
154 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 150.082 kb on + strand at 150.083 kb on - strand at 150.087 kb on - strand at 150.087 kb on - strand at 150.087 kb on - strand at 150.630 kb on + strand, within H281DRAFT_05193 at 150.689 kb on - strand at 150.730 kb on + strand at 150.730 kb on + strand at 150.731 kb on - strand at 150.731 kb on - strand at 150.731 kb on - strand at 150.731 kb on - strand at 150.731 kb on - strand at 150.731 kb on - strand at 150.793 kb on + strand at 150.793 kb on + strand at 150.794 kb on - strand at 150.794 kb on - strand at 151.040 kb on + strand at 151.040 kb on + strand at 151.041 kb on - strand at 151.041 kb on - strand at 151.041 kb on - strand at 151.183 kb on + strand at 151.253 kb on + strand at 151.254 kb on - strand at 151.254 kb on - strand at 151.469 kb on + strand, within H281DRAFT_05194 at 151.470 kb on - strand, within H281DRAFT_05194 at 151.472 kb on - strand, within H281DRAFT_05194 at 151.590 kb on - strand, within H281DRAFT_05194 at 151.728 kb on - strand, within H281DRAFT_05194 at 151.728 kb on - strand, within H281DRAFT_05194 at 151.805 kb on + strand, within H281DRAFT_05194 at 151.805 kb on + strand, within H281DRAFT_05194 at 151.820 kb on + strand, within H281DRAFT_05194 at 151.944 kb on - strand, within H281DRAFT_05194 at 151.988 kb on + strand, within H281DRAFT_05194 at 151.988 kb on + strand, within H281DRAFT_05194 at 152.018 kb on + strand, within H281DRAFT_05194 at 152.037 kb on - strand, within H281DRAFT_05194 at 152.087 kb on + strand, within H281DRAFT_05194 at 152.087 kb on + strand, within H281DRAFT_05194 at 152.106 kb on - strand, within H281DRAFT_05194 at 152.135 kb on + strand, within H281DRAFT_05194 at 152.135 kb on + strand, within H281DRAFT_05194 at 152.136 kb on - strand, within H281DRAFT_05194 at 152.136 kb on - strand, within H281DRAFT_05194 at 152.144 kb on + strand, within H281DRAFT_05194 at 152.144 kb on + strand, within H281DRAFT_05194 at 152.159 kb on + strand, within H281DRAFT_05194 at 152.437 kb on + strand, within H281DRAFT_05194 at 152.906 kb on + strand, within H281DRAFT_05194 at 153.035 kb on + strand, within H281DRAFT_05194 at 153.060 kb on - strand, within H281DRAFT_05194 at 153.180 kb on - strand, within H281DRAFT_05194 at 153.311 kb on + strand, within H281DRAFT_05194 at 153.416 kb on + strand, within H281DRAFT_05194 at 153.500 kb on + strand at 153.794 kb on - strand at 153.797 kb on + strand at 153.798 kb on - strand at 153.798 kb on - strand at 153.869 kb on + strand at 153.869 kb on + strand at 153.869 kb on + strand at 153.869 kb on + strand at 153.870 kb on - strand at 153.886 kb on + strand at 153.887 kb on - strand at 154.024 kb on - strand at 154.111 kb on - strand, within H281DRAFT_05195 at 154.287 kb on - strand, within H281DRAFT_05195 at 154.287 kb on - strand, within H281DRAFT_05195 at 154.287 kb on - strand, within H281DRAFT_05195 at 154.399 kb on - strand, within H281DRAFT_05195 at 154.439 kb on + strand, within H281DRAFT_05195 at 154.440 kb on - strand, within H281DRAFT_05195 at 154.440 kb on - strand, within H281DRAFT_05195
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 150,082 + +0.2 150,083 - +1.1 150,087 - -0.4 150,087 - -0.0 150,087 - +1.0 150,630 + H281DRAFT_05193 0.86 +1.5 150,689 - +0.2 150,730 + -0.6 150,730 + -0.4 150,731 - +0.6 150,731 - -0.8 150,731 - -1.7 150,731 - -0.7 150,731 - -0.3 150,731 - +1.1 150,793 + +0.4 150,793 + -0.8 150,794 - -0.4 150,794 - +0.7 151,040 + -0.8 151,040 + +0.6 151,041 - -2.4 151,041 - +0.4 151,041 - -0.9 151,183 + +0.0 151,253 + -1.0 151,254 - -1.0 151,254 - -0.0 151,469 + H281DRAFT_05194 0.16 -0.2 151,470 - H281DRAFT_05194 0.16 +0.3 151,472 - H281DRAFT_05194 0.17 -0.2 151,590 - H281DRAFT_05194 0.21 -0.7 151,728 - H281DRAFT_05194 0.26 +0.6 151,728 - H281DRAFT_05194 0.26 +0.4 151,805 + H281DRAFT_05194 0.29 -0.2 151,805 + H281DRAFT_05194 0.29 -1.1 151,820 + H281DRAFT_05194 0.30 +1.3 151,944 - H281DRAFT_05194 0.34 +0.5 151,988 + H281DRAFT_05194 0.36 -2.5 151,988 + H281DRAFT_05194 0.36 -0.3 152,018 + H281DRAFT_05194 0.37 -0.8 152,037 - H281DRAFT_05194 0.38 -2.4 152,087 + H281DRAFT_05194 0.40 +1.0 152,087 + H281DRAFT_05194 0.40 -0.6 152,106 - H281DRAFT_05194 0.40 +0.2 152,135 + H281DRAFT_05194 0.41 -1.4 152,135 + H281DRAFT_05194 0.41 +1.3 152,136 - H281DRAFT_05194 0.41 +1.9 152,136 - H281DRAFT_05194 0.41 -0.0 152,144 + H281DRAFT_05194 0.42 -0.2 152,144 + H281DRAFT_05194 0.42 -0.5 152,159 + H281DRAFT_05194 0.42 -0.2 152,437 + H281DRAFT_05194 0.53 +0.4 152,906 + H281DRAFT_05194 0.70 +0.2 153,035 + H281DRAFT_05194 0.75 -2.1 153,060 - H281DRAFT_05194 0.76 -0.6 153,180 - H281DRAFT_05194 0.81 -1.2 153,311 + H281DRAFT_05194 0.86 +3.5 153,416 + H281DRAFT_05194 0.90 +0.0 153,500 + +0.8 153,794 - +0.6 153,797 + -2.9 153,798 - +0.2 153,798 - -0.4 153,869 + +0.0 153,869 + +0.7 153,869 + -0.1 153,869 + -0.2 153,870 - +0.2 153,886 + +0.9 153,887 - +0.6 154,024 - +0.6 154,111 - H281DRAFT_05195 0.15 +1.1 154,287 - H281DRAFT_05195 0.33 +1.7 154,287 - H281DRAFT_05195 0.33 -3.3 154,287 - H281DRAFT_05195 0.33 -1.1 154,399 - H281DRAFT_05195 0.45 -0.9 154,439 + H281DRAFT_05195 0.49 +0.4 154,440 - H281DRAFT_05195 0.49 -1.1 154,440 - H281DRAFT_05195 0.49 +0.2
Or see this region's nucleotide sequence