Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05128 and H281DRAFT_05129 are separated by 49 nucleotides H281DRAFT_05129 and H281DRAFT_05130 are separated by 91 nucleotides
H281DRAFT_05128: H281DRAFT_05128 - Protein of unknown function (DUF1571), at 76,487 to 77,515
_05128
H281DRAFT_05129: H281DRAFT_05129 - long-chain acyl-CoA synthetase, at 77,565 to 79,397
_05129
H281DRAFT_05130: H281DRAFT_05130 - 3-ketoacyl-CoA thiolase, at 79,489 to 80,790
_05130
Position (kb) 77
78
79
80 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 76.615 kb on - strand, within H281DRAFT_05128 at 76.615 kb on - strand, within H281DRAFT_05128 at 76.656 kb on + strand, within H281DRAFT_05128 at 76.700 kb on + strand, within H281DRAFT_05128 at 76.785 kb on + strand, within H281DRAFT_05128 at 76.786 kb on - strand, within H281DRAFT_05128 at 76.786 kb on - strand, within H281DRAFT_05128 at 76.800 kb on + strand, within H281DRAFT_05128 at 76.800 kb on + strand, within H281DRAFT_05128 at 77.024 kb on - strand, within H281DRAFT_05128 at 77.024 kb on - strand, within H281DRAFT_05128 at 77.117 kb on - strand at 77.118 kb on + strand, within H281DRAFT_05128 at 77.118 kb on + strand, within H281DRAFT_05128 at 77.389 kb on + strand, within H281DRAFT_05128 at 77.677 kb on + strand at 77.851 kb on + strand, within H281DRAFT_05129 at 77.999 kb on - strand, within H281DRAFT_05129 at 77.999 kb on - strand, within H281DRAFT_05129 at 78.191 kb on - strand, within H281DRAFT_05129 at 78.331 kb on + strand, within H281DRAFT_05129 at 78.481 kb on + strand, within H281DRAFT_05129 at 78.622 kb on + strand, within H281DRAFT_05129 at 78.677 kb on + strand, within H281DRAFT_05129 at 78.678 kb on - strand, within H281DRAFT_05129 at 78.678 kb on - strand, within H281DRAFT_05129 at 78.678 kb on - strand, within H281DRAFT_05129 at 79.019 kb on + strand, within H281DRAFT_05129 at 79.114 kb on + strand, within H281DRAFT_05129 at 79.114 kb on + strand at 79.141 kb on + strand, within H281DRAFT_05129 at 79.141 kb on + strand, within H281DRAFT_05129 at 79.142 kb on - strand, within H281DRAFT_05129 at 79.142 kb on - strand, within H281DRAFT_05129 at 79.201 kb on + strand, within H281DRAFT_05129 at 79.280 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 76,615 - H281DRAFT_05128 0.12 -0.3 76,615 - H281DRAFT_05128 0.12 -0.4 76,656 + H281DRAFT_05128 0.16 -0.4 76,700 + H281DRAFT_05128 0.21 +0.7 76,785 + H281DRAFT_05128 0.29 -0.3 76,786 - H281DRAFT_05128 0.29 +0.4 76,786 - H281DRAFT_05128 0.29 -0.3 76,800 + H281DRAFT_05128 0.30 +0.3 76,800 + H281DRAFT_05128 0.30 +0.2 77,024 - H281DRAFT_05128 0.52 +1.2 77,024 - H281DRAFT_05128 0.52 +0.1 77,117 - -0.0 77,118 + H281DRAFT_05128 0.61 +0.3 77,118 + H281DRAFT_05128 0.61 +0.1 77,389 + H281DRAFT_05128 0.88 -1.4 77,677 + -0.9 77,851 + H281DRAFT_05129 0.16 -0.4 77,999 - H281DRAFT_05129 0.24 -0.2 77,999 - H281DRAFT_05129 0.24 +0.2 78,191 - H281DRAFT_05129 0.34 -0.9 78,331 + H281DRAFT_05129 0.42 +0.0 78,481 + H281DRAFT_05129 0.50 -0.2 78,622 + H281DRAFT_05129 0.58 -0.4 78,677 + H281DRAFT_05129 0.61 +0.2 78,678 - H281DRAFT_05129 0.61 -0.2 78,678 - H281DRAFT_05129 0.61 -0.6 78,678 - H281DRAFT_05129 0.61 -0.9 79,019 + H281DRAFT_05129 0.79 +0.2 79,114 + H281DRAFT_05129 0.85 +1.1 79,114 + +0.4 79,141 + H281DRAFT_05129 0.86 -0.6 79,141 + H281DRAFT_05129 0.86 +1.4 79,142 - H281DRAFT_05129 0.86 -2.8 79,142 - H281DRAFT_05129 0.86 -0.1 79,201 + H281DRAFT_05129 0.89 +0.0 79,280 + +1.0
Or see this region's nucleotide sequence