Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05079 and H281DRAFT_05080 are separated by 10 nucleotides H281DRAFT_05080 and H281DRAFT_05081 are separated by 99 nucleotides H281DRAFT_05081 and H281DRAFT_05082 are separated by 129 nucleotides H281DRAFT_05082 and H281DRAFT_05083 are separated by 160 nucleotides
H281DRAFT_05079: H281DRAFT_05079 - small conductance mechanosensitive channel, at 16,423 to 19,092
_05079
H281DRAFT_05080: H281DRAFT_05080 - Predicted metal-dependent enzyme of the double-stranded beta helix superfamily, at 19,103 to 19,546
_05080
H281DRAFT_05081: H281DRAFT_05081 - hypothetical protein, at 19,646 to 19,741
_05081
H281DRAFT_05082: H281DRAFT_05082 - transcriptional regulator, AsnC family, at 19,871 to 20,338
_05082
H281DRAFT_05083: H281DRAFT_05083 - hypothetical protein, at 20,499 to 20,726
_05083
Position (kb) 19
20 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 19.105 kb on - strand at 19.130 kb on + strand at 19.131 kb on - strand at 19.131 kb on - strand at 19.173 kb on + strand, within H281DRAFT_05080 at 19.429 kb on - strand, within H281DRAFT_05080 at 19.467 kb on + strand, within H281DRAFT_05080 at 19.781 kb on - strand at 19.812 kb on - strand at 19.813 kb on + strand at 20.064 kb on + strand, within H281DRAFT_05082 at 20.064 kb on + strand, within H281DRAFT_05082 at 20.065 kb on - strand, within H281DRAFT_05082 at 20.065 kb on - strand, within H281DRAFT_05082 at 20.229 kb on - strand, within H281DRAFT_05082 at 20.258 kb on + strand, within H281DRAFT_05082 at 20.297 kb on + strand at 20.442 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 19,105 - -0.2 19,130 + +0.3 19,131 - -1.8 19,131 - +1.0 19,173 + H281DRAFT_05080 0.16 -0.6 19,429 - H281DRAFT_05080 0.73 -2.8 19,467 + H281DRAFT_05080 0.82 -0.8 19,781 - +0.4 19,812 - +0.2 19,813 + -0.1 20,064 + H281DRAFT_05082 0.41 -0.9 20,064 + H281DRAFT_05082 0.41 +0.6 20,065 - H281DRAFT_05082 0.41 -0.4 20,065 - H281DRAFT_05082 0.41 -0.4 20,229 - H281DRAFT_05082 0.76 -0.8 20,258 + H281DRAFT_05082 0.83 -0.4 20,297 + +1.0 20,442 + +1.4
Or see this region's nucleotide sequence