Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04055 and H281DRAFT_04056 are separated by 128 nucleotides H281DRAFT_04056 and H281DRAFT_04057 are separated by 391 nucleotides
H281DRAFT_04055: H281DRAFT_04055 - Nucleoside-diphosphate-sugar epimerase, at 156,062 to 157,129
_04055
H281DRAFT_04056: H281DRAFT_04056 - CDP-4-dehydro-6-deoxyglucose reductase, at 157,258 to 158,289
_04056
H281DRAFT_04057: H281DRAFT_04057 - acetylornithine aminotransferase apoenzyme, at 158,681 to 159,865
_04057
Position (kb) 157
158
159 Strain fitness (log2 ratio) -2
-1
0
1
2 at 156.292 kb on - strand, within H281DRAFT_04055 at 156.292 kb on - strand, within H281DRAFT_04055 at 156.292 kb on - strand, within H281DRAFT_04055 at 156.480 kb on + strand, within H281DRAFT_04055 at 156.480 kb on + strand, within H281DRAFT_04055 at 156.481 kb on - strand, within H281DRAFT_04055 at 156.481 kb on - strand, within H281DRAFT_04055 at 156.481 kb on - strand, within H281DRAFT_04055 at 156.634 kb on - strand, within H281DRAFT_04055 at 156.707 kb on + strand, within H281DRAFT_04055 at 156.713 kb on - strand, within H281DRAFT_04055 at 157.085 kb on + strand at 157.086 kb on - strand at 157.144 kb on - strand at 157.144 kb on - strand at 157.144 kb on - strand at 157.258 kb on - strand at 157.258 kb on - strand at 157.361 kb on - strand at 157.651 kb on + strand, within H281DRAFT_04056 at 157.652 kb on - strand, within H281DRAFT_04056 at 157.652 kb on - strand, within H281DRAFT_04056 at 157.666 kb on + strand, within H281DRAFT_04056 at 157.705 kb on + strand, within H281DRAFT_04056 at 157.706 kb on - strand, within H281DRAFT_04056 at 157.801 kb on - strand, within H281DRAFT_04056 at 157.969 kb on + strand, within H281DRAFT_04056 at 157.999 kb on + strand, within H281DRAFT_04056 at 157.999 kb on + strand, within H281DRAFT_04056 at 158.000 kb on - strand, within H281DRAFT_04056 at 158.000 kb on - strand, within H281DRAFT_04056 at 158.159 kb on + strand, within H281DRAFT_04056 at 158.160 kb on - strand, within H281DRAFT_04056 at 158.160 kb on - strand, within H281DRAFT_04056 at 158.160 kb on - strand, within H281DRAFT_04056 at 158.160 kb on - strand, within H281DRAFT_04056 at 158.161 kb on + strand, within H281DRAFT_04056 at 158.162 kb on - strand, within H281DRAFT_04056 at 158.242 kb on + strand at 158.322 kb on + strand at 158.427 kb on - strand at 158.441 kb on - strand at 158.441 kb on - strand at 158.441 kb on - strand at 158.657 kb on - strand at 158.717 kb on + strand at 158.717 kb on + strand at 158.717 kb on + strand at 158.718 kb on - strand at 158.718 kb on - strand at 158.793 kb on - strand at 158.907 kb on - strand, within H281DRAFT_04057 at 158.950 kb on + strand, within H281DRAFT_04057 at 158.950 kb on + strand, within H281DRAFT_04057 at 158.950 kb on + strand, within H281DRAFT_04057 at 158.950 kb on + strand, within H281DRAFT_04057 at 158.951 kb on - strand, within H281DRAFT_04057 at 158.951 kb on - strand, within H281DRAFT_04057 at 159.140 kb on + strand, within H281DRAFT_04057 at 159.141 kb on - strand, within H281DRAFT_04057 at 159.141 kb on - strand, within H281DRAFT_04057
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 156,292 - H281DRAFT_04055 0.22 -0.2 156,292 - H281DRAFT_04055 0.22 +0.1 156,292 - H281DRAFT_04055 0.22 +0.4 156,480 + H281DRAFT_04055 0.39 -1.0 156,480 + H281DRAFT_04055 0.39 -1.6 156,481 - H281DRAFT_04055 0.39 +0.2 156,481 - H281DRAFT_04055 0.39 -2.7 156,481 - H281DRAFT_04055 0.39 +0.5 156,634 - H281DRAFT_04055 0.54 +2.4 156,707 + H281DRAFT_04055 0.60 +0.2 156,713 - H281DRAFT_04055 0.61 +0.4 157,085 + -2.6 157,086 - +0.6 157,144 - +1.2 157,144 - +1.8 157,144 - +2.1 157,258 - +1.5 157,258 - +1.8 157,361 - -0.5 157,651 + H281DRAFT_04056 0.38 +2.6 157,652 - H281DRAFT_04056 0.38 +1.6 157,652 - H281DRAFT_04056 0.38 +0.8 157,666 + H281DRAFT_04056 0.40 +2.0 157,705 + H281DRAFT_04056 0.43 -0.5 157,706 - H281DRAFT_04056 0.43 +2.2 157,801 - H281DRAFT_04056 0.53 +0.0 157,969 + H281DRAFT_04056 0.69 +0.0 157,999 + H281DRAFT_04056 0.72 +1.1 157,999 + H281DRAFT_04056 0.72 +1.2 158,000 - H281DRAFT_04056 0.72 +1.0 158,000 - H281DRAFT_04056 0.72 +1.9 158,159 + H281DRAFT_04056 0.87 +2.7 158,160 - H281DRAFT_04056 0.87 +1.3 158,160 - H281DRAFT_04056 0.87 +0.0 158,160 - H281DRAFT_04056 0.87 +0.2 158,160 - H281DRAFT_04056 0.87 +0.3 158,161 + H281DRAFT_04056 0.88 +1.0 158,162 - H281DRAFT_04056 0.88 +2.6 158,242 + +1.1 158,322 + +2.0 158,427 - -1.4 158,441 - -0.2 158,441 - +1.0 158,441 - +0.7 158,657 - +0.1 158,717 + +0.5 158,717 + +0.4 158,717 + +1.1 158,718 - +0.9 158,718 - -1.1 158,793 - +0.6 158,907 - H281DRAFT_04057 0.19 -0.1 158,950 + H281DRAFT_04057 0.23 +0.5 158,950 + H281DRAFT_04057 0.23 +0.1 158,950 + H281DRAFT_04057 0.23 +0.7 158,950 + H281DRAFT_04057 0.23 +0.3 158,951 - H281DRAFT_04057 0.23 -1.4 158,951 - H281DRAFT_04057 0.23 -2.1 159,140 + H281DRAFT_04057 0.39 +0.6 159,141 - H281DRAFT_04057 0.39 +1.2 159,141 - H281DRAFT_04057 0.39 -0.8
Or see this region's nucleotide sequence