Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03624 and H281DRAFT_03625 are separated by 174 nucleotides H281DRAFT_03625 and H281DRAFT_03626 are separated by 198 nucleotides H281DRAFT_03626 and H281DRAFT_03627 overlap by 8 nucleotides H281DRAFT_03627 and H281DRAFT_03628 are separated by 357 nucleotides H281DRAFT_03628 and H281DRAFT_03629 are separated by 205 nucleotides
H281DRAFT_03624: H281DRAFT_03624 - cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases, at 135,323 to 136,036
_03624
H281DRAFT_03625: H281DRAFT_03625 - hypothetical protein, at 136,211 to 136,573
_03625
H281DRAFT_03626: H281DRAFT_03626 - hypothetical protein, at 136,772 to 137,032
_03626
H281DRAFT_03627: H281DRAFT_03627 - endonuclease G, at 137,025 to 137,774
_03627
H281DRAFT_03628: H281DRAFT_03628 - Protein of unknown function (DUF3564), at 138,132 to 138,491
_03628
H281DRAFT_03629: H281DRAFT_03629 - protein of unknown function (DUF4410), at 138,697 to 139,371
_03629
Position (kb) 137
138 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 136.027 kb on + strand at 136.028 kb on - strand at 136.028 kb on - strand at 136.028 kb on - strand at 136.073 kb on + strand at 136.156 kb on + strand at 136.170 kb on + strand at 136.632 kb on + strand at 136.713 kb on - strand at 136.727 kb on + strand at 136.758 kb on + strand at 136.759 kb on - strand at 137.026 kb on + strand at 137.187 kb on + strand, within H281DRAFT_03627 at 137.187 kb on + strand, within H281DRAFT_03627 at 137.187 kb on + strand, within H281DRAFT_03627 at 137.188 kb on - strand, within H281DRAFT_03627 at 137.191 kb on + strand, within H281DRAFT_03627 at 137.192 kb on - strand, within H281DRAFT_03627 at 137.284 kb on + strand, within H281DRAFT_03627 at 137.284 kb on + strand, within H281DRAFT_03627 at 137.285 kb on - strand, within H281DRAFT_03627 at 137.285 kb on - strand, within H281DRAFT_03627 at 137.285 kb on - strand, within H281DRAFT_03627 at 137.438 kb on + strand, within H281DRAFT_03627 at 137.438 kb on + strand, within H281DRAFT_03627 at 137.438 kb on + strand, within H281DRAFT_03627 at 137.601 kb on - strand, within H281DRAFT_03627 at 137.601 kb on - strand, within H281DRAFT_03627 at 137.633 kb on - strand, within H281DRAFT_03627 at 137.693 kb on + strand, within H281DRAFT_03627 at 137.693 kb on + strand, within H281DRAFT_03627 at 137.807 kb on + strand at 137.807 kb on + strand at 137.807 kb on + strand at 137.808 kb on - strand at 137.808 kb on - strand at 137.809 kb on + strand at 137.810 kb on - strand at 137.951 kb on + strand at 137.952 kb on - strand at 137.973 kb on - strand at 137.987 kb on - strand at 137.987 kb on - strand at 137.997 kb on + strand at 137.997 kb on + strand at 137.998 kb on - strand at 137.998 kb on - strand at 137.998 kb on - strand at 138.057 kb on + strand at 138.058 kb on - strand at 138.134 kb on - strand at 138.282 kb on + strand, within H281DRAFT_03628 at 138.282 kb on + strand, within H281DRAFT_03628 at 138.283 kb on - strand, within H281DRAFT_03628 at 138.283 kb on - strand, within H281DRAFT_03628 at 138.283 kb on - strand, within H281DRAFT_03628 at 138.283 kb on - strand, within H281DRAFT_03628 at 138.296 kb on + strand, within H281DRAFT_03628 at 138.296 kb on + strand, within H281DRAFT_03628 at 138.430 kb on - strand, within H281DRAFT_03628 at 138.473 kb on + strand at 138.474 kb on - strand at 138.492 kb on - strand at 138.532 kb on + strand at 138.549 kb on + strand at 138.609 kb on + strand at 138.774 kb on + strand, within H281DRAFT_03629
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 136,027 + -0.6 136,028 - -3.1 136,028 - +2.6 136,028 - +1.0 136,073 + -1.0 136,156 + +0.9 136,170 + -2.1 136,632 + -0.1 136,713 - -0.9 136,727 + +1.2 136,758 + -1.1 136,759 - -1.4 137,026 + -2.4 137,187 + H281DRAFT_03627 0.22 -1.2 137,187 + H281DRAFT_03627 0.22 -1.9 137,187 + H281DRAFT_03627 0.22 -1.9 137,188 - H281DRAFT_03627 0.22 -0.9 137,191 + H281DRAFT_03627 0.22 -1.6 137,192 - H281DRAFT_03627 0.22 -2.8 137,284 + H281DRAFT_03627 0.35 -3.1 137,284 + H281DRAFT_03627 0.35 -0.6 137,285 - H281DRAFT_03627 0.35 -2.7 137,285 - H281DRAFT_03627 0.35 -1.2 137,285 - H281DRAFT_03627 0.35 -1.0 137,438 + H281DRAFT_03627 0.55 -0.5 137,438 + H281DRAFT_03627 0.55 -1.2 137,438 + H281DRAFT_03627 0.55 -1.0 137,601 - H281DRAFT_03627 0.77 -2.4 137,601 - H281DRAFT_03627 0.77 -1.2 137,633 - H281DRAFT_03627 0.81 +0.8 137,693 + H281DRAFT_03627 0.89 -1.1 137,693 + H281DRAFT_03627 0.89 -2.0 137,807 + +0.3 137,807 + -0.4 137,807 + +1.1 137,808 - -2.4 137,808 - -0.8 137,809 + -1.8 137,810 - +0.3 137,951 + +1.1 137,952 - -1.0 137,973 - -0.2 137,987 - -0.3 137,987 - -0.8 137,997 + -0.8 137,997 + +1.6 137,998 - -0.0 137,998 - +1.0 137,998 - -0.6 138,057 + -0.3 138,058 - -0.1 138,134 - +0.6 138,282 + H281DRAFT_03628 0.42 -0.3 138,282 + H281DRAFT_03628 0.42 -1.4 138,283 - H281DRAFT_03628 0.42 +0.6 138,283 - H281DRAFT_03628 0.42 +0.5 138,283 - H281DRAFT_03628 0.42 +0.7 138,283 - H281DRAFT_03628 0.42 -0.7 138,296 + H281DRAFT_03628 0.46 +0.1 138,296 + H281DRAFT_03628 0.46 -0.1 138,430 - H281DRAFT_03628 0.83 +0.1 138,473 + -1.8 138,474 - +0.1 138,492 - -0.3 138,532 + -0.5 138,549 + +0.1 138,609 + -0.5 138,774 + H281DRAFT_03629 0.11 -0.1
Or see this region's nucleotide sequence