Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03439 and H281DRAFT_03440 overlap by 25 nucleotides H281DRAFT_03440 and H281DRAFT_03441 are separated by 77 nucleotides
H281DRAFT_03439: H281DRAFT_03439 - Glycosyltransferase involved in cell wall bisynthesis, at 519,732 to 520,919
_03439
H281DRAFT_03440: H281DRAFT_03440 - PAP2 superfamily protein, at 520,895 to 521,530
_03440
H281DRAFT_03441: H281DRAFT_03441 - O-antigen ligase, at 521,608 to 522,855
_03441
Position (kb) 520
521
522 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 519.933 kb on + strand, within H281DRAFT_03439 at 519.934 kb on - strand, within H281DRAFT_03439 at 519.992 kb on + strand, within H281DRAFT_03439 at 520.164 kb on + strand, within H281DRAFT_03439 at 520.165 kb on - strand, within H281DRAFT_03439 at 520.359 kb on + strand at 520.360 kb on - strand, within H281DRAFT_03439 at 520.450 kb on + strand, within H281DRAFT_03439 at 520.736 kb on + strand, within H281DRAFT_03439 at 520.737 kb on - strand, within H281DRAFT_03439 at 520.918 kb on - strand at 521.174 kb on - strand, within H281DRAFT_03440 at 521.174 kb on - strand, within H281DRAFT_03440 at 521.507 kb on + strand at 521.520 kb on - strand at 521.520 kb on - strand at 521.598 kb on + strand at 521.848 kb on - strand, within H281DRAFT_03441 at 522.099 kb on - strand, within H281DRAFT_03441 at 522.443 kb on + strand, within H281DRAFT_03441 at 522.444 kb on - strand, within H281DRAFT_03441 at 522.503 kb on + strand, within H281DRAFT_03441
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 519,933 + H281DRAFT_03439 0.17 +0.6 519,934 - H281DRAFT_03439 0.17 +1.1 519,992 + H281DRAFT_03439 0.22 -2.6 520,164 + H281DRAFT_03439 0.36 +1.2 520,165 - H281DRAFT_03439 0.36 -0.1 520,359 + -0.6 520,360 - H281DRAFT_03439 0.53 +0.5 520,450 + H281DRAFT_03439 0.60 +0.5 520,736 + H281DRAFT_03439 0.85 +1.0 520,737 - H281DRAFT_03439 0.85 +0.8 520,918 - +0.4 521,174 - H281DRAFT_03440 0.44 +2.0 521,174 - H281DRAFT_03440 0.44 -3.8 521,507 + +0.0 521,520 - +0.0 521,520 - -0.0 521,598 + -0.4 521,848 - H281DRAFT_03441 0.19 -0.8 522,099 - H281DRAFT_03441 0.39 +0.7 522,443 + H281DRAFT_03441 0.67 +0.6 522,444 - H281DRAFT_03441 0.67 -2.1 522,503 + H281DRAFT_03441 0.72 +0.6
Or see this region's nucleotide sequence