Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03369 and H281DRAFT_03370 are separated by 9 nucleotides H281DRAFT_03370 and H281DRAFT_03371 overlap by 4 nucleotides
H281DRAFT_03369: H281DRAFT_03369 - membrane fusion protein, multidrug efflux system, at 430,328 to 431,386
_03369
H281DRAFT_03370: H281DRAFT_03370 - multidrug resistance protein MdtO, at 431,396 to 433,504
_03370
H281DRAFT_03371: H281DRAFT_03371 - outer membrane protein, multidrug efflux system, at 433,501 to 434,988
_03371
Position (kb) 431
432
433
434 Strain fitness (log2 ratio) -2
-1
0
1 at 430.398 kb on + strand at 430.416 kb on + strand at 430.416 kb on + strand at 430.454 kb on + strand, within H281DRAFT_03369 at 430.668 kb on - strand, within H281DRAFT_03369 at 430.745 kb on - strand, within H281DRAFT_03369 at 430.769 kb on + strand, within H281DRAFT_03369 at 430.770 kb on - strand, within H281DRAFT_03369 at 430.770 kb on - strand, within H281DRAFT_03369 at 430.872 kb on + strand, within H281DRAFT_03369 at 431.063 kb on + strand, within H281DRAFT_03369 at 431.431 kb on - strand at 431.591 kb on + strand at 431.591 kb on + strand at 431.754 kb on - strand, within H281DRAFT_03370 at 431.814 kb on - strand, within H281DRAFT_03370 at 431.814 kb on - strand, within H281DRAFT_03370 at 432.163 kb on - strand, within H281DRAFT_03370 at 432.302 kb on + strand, within H281DRAFT_03370 at 432.476 kb on + strand, within H281DRAFT_03370 at 432.476 kb on + strand, within H281DRAFT_03370 at 432.476 kb on + strand, within H281DRAFT_03370 at 432.477 kb on - strand, within H281DRAFT_03370 at 432.521 kb on + strand, within H281DRAFT_03370 at 432.530 kb on + strand, within H281DRAFT_03370 at 432.783 kb on - strand, within H281DRAFT_03370 at 432.783 kb on - strand, within H281DRAFT_03370 at 433.148 kb on - strand, within H281DRAFT_03370 at 434.116 kb on + strand, within H281DRAFT_03371 at 434.116 kb on + strand, within H281DRAFT_03371
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 430,398 + +0.1 430,416 + +0.3 430,416 + -0.6 430,454 + H281DRAFT_03369 0.12 +0.5 430,668 - H281DRAFT_03369 0.32 -1.0 430,745 - H281DRAFT_03369 0.39 +0.7 430,769 + H281DRAFT_03369 0.42 -0.4 430,770 - H281DRAFT_03369 0.42 +0.1 430,770 - H281DRAFT_03369 0.42 -0.5 430,872 + H281DRAFT_03369 0.51 -0.1 431,063 + H281DRAFT_03369 0.69 -1.1 431,431 - -0.2 431,591 + -1.1 431,591 + +1.3 431,754 - H281DRAFT_03370 0.17 +0.4 431,814 - H281DRAFT_03370 0.20 -0.5 431,814 - H281DRAFT_03370 0.20 -0.6 432,163 - H281DRAFT_03370 0.36 -0.3 432,302 + H281DRAFT_03370 0.43 -0.5 432,476 + H281DRAFT_03370 0.51 +0.2 432,476 + H281DRAFT_03370 0.51 +1.7 432,476 + H281DRAFT_03370 0.51 -1.1 432,477 - H281DRAFT_03370 0.51 -0.3 432,521 + H281DRAFT_03370 0.53 -0.8 432,530 + H281DRAFT_03370 0.54 +0.3 432,783 - H281DRAFT_03370 0.66 -0.5 432,783 - H281DRAFT_03370 0.66 +0.3 433,148 - H281DRAFT_03370 0.83 -2.5 434,116 + H281DRAFT_03371 0.41 -1.0 434,116 + H281DRAFT_03371 0.41 +0.0
Or see this region's nucleotide sequence