Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03022 and H281DRAFT_03023 overlap by 19 nucleotides H281DRAFT_03023 and H281DRAFT_03024 are separated by 204 nucleotides H281DRAFT_03024 and H281DRAFT_03025 are separated by 265 nucleotides
H281DRAFT_03022: H281DRAFT_03022 - 2-hydroxychromene-2-carboxylate isomerase, at 49,701 to 50,333
_03022
H281DRAFT_03023: H281DRAFT_03023 - Protein of unknown function (DUF2866), at 50,315 to 50,572
_03023
H281DRAFT_03024: H281DRAFT_03024 - peptidoglycan synthetase FtsI, at 50,777 to 52,513
_03024
H281DRAFT_03025: H281DRAFT_03025 - methyl-accepting chemotaxis sensory transducer with Cache sensor, at 52,779 to 54,320
_03025
Position (kb) 50
51
52
53 Strain fitness (log2 ratio) -1
0
1 at 49.779 kb on + strand, within H281DRAFT_03022 at 50.390 kb on - strand, within H281DRAFT_03023 at 50.555 kb on + strand at 50.556 kb on - strand at 50.717 kb on + strand at 50.772 kb on + strand at 50.772 kb on + strand at 50.773 kb on - strand at 50.773 kb on - strand at 52.570 kb on + strand at 52.571 kb on - strand at 52.582 kb on - strand at 52.582 kb on - strand at 52.664 kb on + strand at 52.694 kb on + strand at 52.694 kb on + strand at 52.694 kb on + strand at 52.695 kb on - strand at 52.770 kb on + strand at 52.771 kb on - strand at 53.060 kb on + strand, within H281DRAFT_03025 at 53.478 kb on - strand, within H281DRAFT_03025
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 49,779 + H281DRAFT_03022 0.12 +0.5 50,390 - H281DRAFT_03023 0.29 +0.2 50,555 + +0.7 50,556 - +0.3 50,717 + +0.2 50,772 + -1.1 50,772 + +0.5 50,773 - +0.5 50,773 - -0.3 52,570 + +0.3 52,571 - +0.4 52,582 - +0.8 52,582 - +0.4 52,664 + -0.5 52,694 + +0.2 52,694 + -0.3 52,694 + +0.5 52,695 - -0.3 52,770 + +0.8 52,771 - +0.4 53,060 + H281DRAFT_03025 0.18 +0.8 53,478 - H281DRAFT_03025 0.45 -0.6
Or see this region's nucleotide sequence