Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02657 and H281DRAFT_02658 are separated by 28 nucleotides H281DRAFT_02658 and H281DRAFT_02659 are separated by 115 nucleotides H281DRAFT_02659 and H281DRAFT_02660 are separated by 123 nucleotides
H281DRAFT_02657: H281DRAFT_02657 - cyanate lyase, at 237,893 to 238,363
_02657
H281DRAFT_02658: H281DRAFT_02658 - carbonic anhydrase, at 238,392 to 239,051
_02658
H281DRAFT_02659: H281DRAFT_02659 - LysR family transcriptional regulator, cyn operon transcriptional activator, at 239,167 to 240,051
_02659
H281DRAFT_02660: H281DRAFT_02660 - formamidase, at 240,175 to 241,206
_02660
Position (kb) 239
240
241 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 238.508 kb on - strand, within H281DRAFT_02658 at 238.805 kb on - strand, within H281DRAFT_02658 at 238.944 kb on - strand, within H281DRAFT_02658 at 239.111 kb on - strand at 239.294 kb on + strand, within H281DRAFT_02659 at 240.050 kb on - strand at 240.151 kb on + strand at 240.347 kb on - strand, within H281DRAFT_02660 at 240.449 kb on - strand, within H281DRAFT_02660 at 240.544 kb on + strand, within H281DRAFT_02660 at 240.584 kb on - strand, within H281DRAFT_02660 at 240.590 kb on - strand, within H281DRAFT_02660 at 240.590 kb on - strand, within H281DRAFT_02660 at 240.590 kb on - strand, within H281DRAFT_02660 at 240.833 kb on + strand, within H281DRAFT_02660 at 240.834 kb on - strand, within H281DRAFT_02660 at 240.976 kb on + strand, within H281DRAFT_02660
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 238,508 - H281DRAFT_02658 0.18 -0.8 238,805 - H281DRAFT_02658 0.63 -3.3 238,944 - H281DRAFT_02658 0.84 -0.1 239,111 - -0.2 239,294 + H281DRAFT_02659 0.14 +1.0 240,050 - +1.1 240,151 + +0.7 240,347 - H281DRAFT_02660 0.17 +0.7 240,449 - H281DRAFT_02660 0.27 -0.6 240,544 + H281DRAFT_02660 0.36 +0.6 240,584 - H281DRAFT_02660 0.40 +0.7 240,590 - H281DRAFT_02660 0.40 -0.0 240,590 - H281DRAFT_02660 0.40 +0.2 240,590 - H281DRAFT_02660 0.40 +0.4 240,833 + H281DRAFT_02660 0.64 -0.7 240,834 - H281DRAFT_02660 0.64 +0.7 240,976 + H281DRAFT_02660 0.78 +0.3
Or see this region's nucleotide sequence