Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02260 and H281DRAFT_02261 are separated by 16 nucleotides H281DRAFT_02261 and H281DRAFT_02262 are separated by 202 nucleotides H281DRAFT_02262 and H281DRAFT_02263 overlap by 8 nucleotides H281DRAFT_02263 and H281DRAFT_02264 are separated by 87 nucleotides
H281DRAFT_02260: H281DRAFT_02260 - Zn-dependent peptidase ImmA, M78 family, at 406,439 to 407,647
_02260
H281DRAFT_02261: H281DRAFT_02261 - hypothetical protein, at 407,664 to 408,299
_02261
H281DRAFT_02262: H281DRAFT_02262 - hypothetical protein, at 408,502 to 408,633
_02262
H281DRAFT_02263: H281DRAFT_02263 - hypothetical protein, at 408,626 to 409,114
_02263
H281DRAFT_02264: H281DRAFT_02264 - phage/plasmid-like protein TIGR03299, at 409,202 to 410,167
_02264
Position (kb) 408
409 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 407.653 kb on - strand at 407.666 kb on - strand at 407.670 kb on - strand at 407.670 kb on - strand at 407.670 kb on - strand at 407.857 kb on - strand, within H281DRAFT_02261 at 407.952 kb on - strand, within H281DRAFT_02261 at 408.064 kb on + strand, within H281DRAFT_02261 at 408.064 kb on + strand, within H281DRAFT_02261 at 408.064 kb on + strand, within H281DRAFT_02261 at 408.065 kb on - strand, within H281DRAFT_02261 at 408.420 kb on + strand at 408.420 kb on + strand at 408.420 kb on + strand at 408.420 kb on + strand at 408.420 kb on + strand at 408.421 kb on - strand at 408.421 kb on - strand at 408.421 kb on - strand at 408.421 kb on - strand at 408.421 kb on - strand at 408.510 kb on + strand at 408.526 kb on + strand, within H281DRAFT_02262 at 408.527 kb on - strand, within H281DRAFT_02262 at 408.557 kb on + strand, within H281DRAFT_02262 at 408.557 kb on + strand, within H281DRAFT_02262 at 408.590 kb on - strand, within H281DRAFT_02262 at 408.648 kb on - strand at 408.753 kb on + strand, within H281DRAFT_02263 at 408.753 kb on + strand, within H281DRAFT_02263 at 408.753 kb on + strand, within H281DRAFT_02263 at 408.754 kb on - strand, within H281DRAFT_02263 at 408.788 kb on + strand, within H281DRAFT_02263 at 408.789 kb on - strand, within H281DRAFT_02263 at 408.789 kb on - strand, within H281DRAFT_02263 at 408.789 kb on - strand, within H281DRAFT_02263 at 408.789 kb on - strand, within H281DRAFT_02263 at 408.789 kb on - strand, within H281DRAFT_02263 at 408.799 kb on + strand, within H281DRAFT_02263 at 408.915 kb on + strand, within H281DRAFT_02263 at 408.915 kb on + strand at 408.916 kb on - strand, within H281DRAFT_02263 at 408.916 kb on - strand, within H281DRAFT_02263 at 408.916 kb on - strand, within H281DRAFT_02263 at 408.916 kb on - strand, within H281DRAFT_02263 at 408.916 kb on - strand, within H281DRAFT_02263 at 409.112 kb on + strand at 409.152 kb on - strand at 409.176 kb on + strand at 409.176 kb on + strand at 409.177 kb on - strand at 409.177 kb on - strand at 409.199 kb on + strand at 409.199 kb on + strand at 409.226 kb on + strand at 409.226 kb on + strand at 409.226 kb on + strand at 409.227 kb on - strand at 409.227 kb on - strand at 409.404 kb on + strand, within H281DRAFT_02264 at 409.409 kb on + strand, within H281DRAFT_02264 at 409.410 kb on - strand, within H281DRAFT_02264 at 409.410 kb on - strand, within H281DRAFT_02264 at 409.410 kb on - strand, within H281DRAFT_02264 at 409.455 kb on - strand, within H281DRAFT_02264 at 409.490 kb on + strand, within H281DRAFT_02264 at 409.490 kb on + strand, within H281DRAFT_02264 at 409.491 kb on - strand, within H281DRAFT_02264 at 409.622 kb on + strand, within H281DRAFT_02264 at 409.626 kb on + strand, within H281DRAFT_02264 at 409.627 kb on - strand, within H281DRAFT_02264 at 409.627 kb on - strand, within H281DRAFT_02264
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 407,653 - -1.7 407,666 - -1.0 407,670 - -0.8 407,670 - +1.4 407,670 - -1.0 407,857 - H281DRAFT_02261 0.30 +1.0 407,952 - H281DRAFT_02261 0.45 +0.3 408,064 + H281DRAFT_02261 0.63 -1.5 408,064 + H281DRAFT_02261 0.63 +1.6 408,064 + H281DRAFT_02261 0.63 +2.5 408,065 - H281DRAFT_02261 0.63 -1.3 408,420 + +0.3 408,420 + +0.0 408,420 + +0.2 408,420 + +0.0 408,420 + -0.5 408,421 - -0.8 408,421 - +0.5 408,421 - +0.5 408,421 - -0.5 408,421 - -1.8 408,510 + -1.4 408,526 + H281DRAFT_02262 0.18 -0.1 408,527 - H281DRAFT_02262 0.19 -1.1 408,557 + H281DRAFT_02262 0.42 -1.1 408,557 + H281DRAFT_02262 0.42 -1.7 408,590 - H281DRAFT_02262 0.67 -1.9 408,648 - +0.5 408,753 + H281DRAFT_02263 0.26 -0.1 408,753 + H281DRAFT_02263 0.26 +1.5 408,753 + H281DRAFT_02263 0.26 -1.6 408,754 - H281DRAFT_02263 0.26 -1.1 408,788 + H281DRAFT_02263 0.33 -1.4 408,789 - H281DRAFT_02263 0.33 +3.6 408,789 - H281DRAFT_02263 0.33 -0.2 408,789 - H281DRAFT_02263 0.33 -0.5 408,789 - H281DRAFT_02263 0.33 -1.0 408,789 - H281DRAFT_02263 0.33 -1.4 408,799 + H281DRAFT_02263 0.35 +0.7 408,915 + H281DRAFT_02263 0.59 -0.2 408,915 + -1.1 408,916 - H281DRAFT_02263 0.59 -0.5 408,916 - H281DRAFT_02263 0.59 -1.1 408,916 - H281DRAFT_02263 0.59 -0.2 408,916 - H281DRAFT_02263 0.59 -0.7 408,916 - H281DRAFT_02263 0.59 +1.3 409,112 + +0.5 409,152 - -1.0 409,176 + +0.1 409,176 + -0.7 409,177 - -2.1 409,177 - +0.5 409,199 + +1.0 409,199 + +1.1 409,226 + +0.5 409,226 + -0.4 409,226 + -1.1 409,227 - +1.6 409,227 - +0.2 409,404 + H281DRAFT_02264 0.21 +1.0 409,409 + H281DRAFT_02264 0.21 +1.1 409,410 - H281DRAFT_02264 0.22 +0.9 409,410 - H281DRAFT_02264 0.22 +0.0 409,410 - H281DRAFT_02264 0.22 -0.8 409,455 - H281DRAFT_02264 0.26 +1.1 409,490 + H281DRAFT_02264 0.30 -1.9 409,490 + H281DRAFT_02264 0.30 +0.1 409,491 - H281DRAFT_02264 0.30 -1.3 409,622 + H281DRAFT_02264 0.43 -2.6 409,626 + H281DRAFT_02264 0.44 -1.7 409,627 - H281DRAFT_02264 0.44 -0.7 409,627 - H281DRAFT_02264 0.44 -0.3
Or see this region's nucleotide sequence