Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02244 and H281DRAFT_02245 are separated by 156 nucleotides H281DRAFT_02245 and H281DRAFT_02246 are separated by 343 nucleotides
H281DRAFT_02244: H281DRAFT_02244 - DNA topoisomerase-3, at 388,655 to 391,324
_02244
H281DRAFT_02245: H281DRAFT_02245 - transcriptional regulator, LysR family, at 391,481 to 392,584
_02245
H281DRAFT_02246: H281DRAFT_02246 - phosphoenolpyruvate carboxykinase (GTP), at 392,928 to 394,796
_02246
Position (kb) 391
392
393 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 391.309 kb on + strand at 391.388 kb on + strand at 391.449 kb on + strand at 391.482 kb on + strand at 391.804 kb on - strand, within H281DRAFT_02245 at 391.857 kb on + strand, within H281DRAFT_02245 at 391.858 kb on - strand, within H281DRAFT_02245 at 391.972 kb on + strand, within H281DRAFT_02245 at 391.977 kb on - strand, within H281DRAFT_02245 at 391.995 kb on + strand, within H281DRAFT_02245 at 391.995 kb on + strand, within H281DRAFT_02245 at 391.995 kb on + strand, within H281DRAFT_02245 at 391.995 kb on + strand, within H281DRAFT_02245 at 391.996 kb on - strand, within H281DRAFT_02245 at 392.070 kb on + strand, within H281DRAFT_02245 at 392.244 kb on + strand, within H281DRAFT_02245 at 392.244 kb on + strand, within H281DRAFT_02245 at 392.245 kb on - strand, within H281DRAFT_02245 at 392.309 kb on - strand, within H281DRAFT_02245 at 392.392 kb on - strand, within H281DRAFT_02245 at 392.392 kb on - strand, within H281DRAFT_02245 at 392.453 kb on + strand, within H281DRAFT_02245 at 392.503 kb on + strand at 392.503 kb on + strand at 392.584 kb on + strand at 392.584 kb on + strand at 392.585 kb on - strand at 392.585 kb on - strand at 392.604 kb on + strand at 392.604 kb on + strand at 392.645 kb on + strand at 392.645 kb on + strand at 392.646 kb on - strand at 392.646 kb on - strand at 392.657 kb on + strand at 392.657 kb on + strand at 392.731 kb on + strand at 392.731 kb on + strand at 392.813 kb on + strand at 392.813 kb on + strand at 392.814 kb on - strand at 393.115 kb on + strand, within H281DRAFT_02246 at 393.328 kb on + strand, within H281DRAFT_02246 at 393.329 kb on - strand, within H281DRAFT_02246 at 393.442 kb on + strand, within H281DRAFT_02246 at 393.443 kb on - strand, within H281DRAFT_02246 at 393.443 kb on - strand, within H281DRAFT_02246 at 393.443 kb on - strand, within H281DRAFT_02246 at 393.561 kb on - strand, within H281DRAFT_02246
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 391,309 + -1.8 391,388 + +0.4 391,449 + -0.6 391,482 + -1.5 391,804 - H281DRAFT_02245 0.29 -3.1 391,857 + H281DRAFT_02245 0.34 -3.0 391,858 - H281DRAFT_02245 0.34 -2.2 391,972 + H281DRAFT_02245 0.44 -1.3 391,977 - H281DRAFT_02245 0.45 -1.6 391,995 + H281DRAFT_02245 0.47 -1.4 391,995 + H281DRAFT_02245 0.47 +0.0 391,995 + H281DRAFT_02245 0.47 -1.7 391,995 + H281DRAFT_02245 0.47 -2.4 391,996 - H281DRAFT_02245 0.47 -2.7 392,070 + H281DRAFT_02245 0.53 +1.0 392,244 + H281DRAFT_02245 0.69 -1.7 392,244 + H281DRAFT_02245 0.69 -2.0 392,245 - H281DRAFT_02245 0.69 -2.2 392,309 - H281DRAFT_02245 0.75 -4.2 392,392 - H281DRAFT_02245 0.83 -2.1 392,392 - H281DRAFT_02245 0.83 -3.9 392,453 + H281DRAFT_02245 0.88 -1.5 392,503 + -4.8 392,503 + -1.0 392,584 + +0.0 392,584 + -2.4 392,585 - -2.2 392,585 - -1.7 392,604 + -1.1 392,604 + -2.8 392,645 + -1.1 392,645 + -4.5 392,646 - -0.2 392,646 - +0.5 392,657 + -0.4 392,657 + -3.2 392,731 + +0.3 392,731 + -0.5 392,813 + +0.0 392,813 + +1.9 392,814 - -2.0 393,115 + H281DRAFT_02246 0.10 -0.1 393,328 + H281DRAFT_02246 0.21 -0.2 393,329 - H281DRAFT_02246 0.21 +0.9 393,442 + H281DRAFT_02246 0.28 -0.7 393,443 - H281DRAFT_02246 0.28 -1.0 393,443 - H281DRAFT_02246 0.28 +0.3 393,443 - H281DRAFT_02246 0.28 -0.7 393,561 - H281DRAFT_02246 0.34 -0.5
Or see this region's nucleotide sequence