Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01055 and H281DRAFT_01056 overlap by 4 nucleotides H281DRAFT_01056 and H281DRAFT_01057 overlap by 17 nucleotides H281DRAFT_01057 and H281DRAFT_01058 overlap by 4 nucleotides
H281DRAFT_01055: H281DRAFT_01055 - monosaccharide ABC transporter membrane protein, CUT2 family, at 1,184,855 to 1,185,823
_01055
H281DRAFT_01056: H281DRAFT_01056 - monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-), at 1,185,820 to 1,186,803
_01056
H281DRAFT_01057: H281DRAFT_01057 - monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-), at 1,186,787 to 1,188,340
_01057
H281DRAFT_01058: H281DRAFT_01058 - monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-), at 1,188,337 to 1,189,491
_01058
Position (kb) 1186
1187
1188
1189 Strain fitness (log2 ratio) -1
0
1
2 at 1186.092 kb on + strand, within H281DRAFT_01056 at 1186.199 kb on - strand, within H281DRAFT_01056 at 1186.200 kb on - strand, within H281DRAFT_01056 at 1186.205 kb on + strand at 1186.206 kb on - strand, within H281DRAFT_01056 at 1186.301 kb on + strand, within H281DRAFT_01056 at 1186.355 kb on + strand, within H281DRAFT_01056 at 1187.167 kb on - strand, within H281DRAFT_01057 at 1187.580 kb on + strand, within H281DRAFT_01057 at 1187.580 kb on + strand, within H281DRAFT_01057 at 1187.730 kb on + strand, within H281DRAFT_01057 at 1188.157 kb on - strand, within H281DRAFT_01057 at 1188.410 kb on - strand at 1188.526 kb on - strand, within H281DRAFT_01058 at 1188.763 kb on - strand, within H281DRAFT_01058 at 1188.771 kb on - strand, within H281DRAFT_01058
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 1,186,092 + H281DRAFT_01056 0.28 +0.8 1,186,199 - H281DRAFT_01056 0.39 -0.9 1,186,200 - H281DRAFT_01056 0.39 -1.0 1,186,205 + +0.1 1,186,206 - H281DRAFT_01056 0.39 +0.3 1,186,301 + H281DRAFT_01056 0.49 +0.5 1,186,355 + H281DRAFT_01056 0.54 -0.2 1,187,167 - H281DRAFT_01057 0.24 +1.1 1,187,580 + H281DRAFT_01057 0.51 +0.5 1,187,580 + H281DRAFT_01057 0.51 +0.1 1,187,730 + H281DRAFT_01057 0.61 +0.2 1,188,157 - H281DRAFT_01057 0.88 +0.6 1,188,410 - +2.5 1,188,526 - H281DRAFT_01058 0.16 +0.4 1,188,763 - H281DRAFT_01058 0.37 +1.4 1,188,771 - H281DRAFT_01058 0.38 +0.7
Or see this region's nucleotide sequence