Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00716 and H281DRAFT_00717 are separated by 269 nucleotides H281DRAFT_00717 and H281DRAFT_00718 are separated by 231 nucleotides H281DRAFT_00718 and H281DRAFT_00719 are separated by 23 nucleotides
H281DRAFT_00716: H281DRAFT_00716 - Glycosyltransferase involved in cell wall bisynthesis, at 804,877 to 806,094
_00716
H281DRAFT_00717: H281DRAFT_00717 - HTH-type transcriptional regulator / antitoxin HigA, at 806,364 to 806,786
_00717
H281DRAFT_00718: H281DRAFT_00718 - tyrosine-protein kinase Etk/Wzc, at 807,018 to 809,429
_00718
H281DRAFT_00719: H281DRAFT_00719 - polysaccharide export outer membrane protein, at 809,453 to 810,646
_00719
Position (kb) 807
808
809
810 Strain fitness (log2 ratio) -1
0
1 at 806.441 kb on + strand, within H281DRAFT_00717 at 806.563 kb on + strand, within H281DRAFT_00717 at 806.589 kb on - strand, within H281DRAFT_00717 at 806.620 kb on + strand at 806.784 kb on + strand at 806.785 kb on - strand at 807.082 kb on + strand at 807.082 kb on + strand at 807.083 kb on - strand at 807.701 kb on - strand, within H281DRAFT_00718 at 808.669 kb on + strand, within H281DRAFT_00718 at 808.988 kb on - strand, within H281DRAFT_00718 at 809.260 kb on + strand at 809.325 kb on + strand at 809.476 kb on - strand at 809.551 kb on - strand at 809.877 kb on - strand, within H281DRAFT_00719 at 809.886 kb on - strand, within H281DRAFT_00719
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 806,441 + H281DRAFT_00717 0.18 -1.7 806,563 + H281DRAFT_00717 0.47 -0.3 806,589 - H281DRAFT_00717 0.53 -0.5 806,620 + -0.6 806,784 + +0.6 806,785 - -1.1 807,082 + +1.4 807,082 + -0.1 807,083 - -0.3 807,701 - H281DRAFT_00718 0.28 -1.4 808,669 + H281DRAFT_00718 0.68 -0.4 808,988 - H281DRAFT_00718 0.82 -1.2 809,260 + -0.3 809,325 + +1.2 809,476 - -1.0 809,551 - -0.1 809,877 - H281DRAFT_00719 0.36 +0.7 809,886 - H281DRAFT_00719 0.36 -0.3
Or see this region's nucleotide sequence