Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00307 and H281DRAFT_00308 are separated by 349 nucleotides H281DRAFT_00308 and H281DRAFT_00309 are separated by 130 nucleotides
H281DRAFT_00307: H281DRAFT_00307 - Acyl-CoA reductase, at 330,635 to 332,071
_00307
H281DRAFT_00308: H281DRAFT_00308 - Superfamily II DNA and RNA helicase, at 332,421 to 333,881
_00308
H281DRAFT_00309: H281DRAFT_00309 - glutamyl-Q tRNA(Asp) synthetase, at 334,012 to 334,974
_00309
Position (kb) 332
333
334 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 331.436 kb on + strand, within H281DRAFT_00307 at 331.436 kb on + strand, within H281DRAFT_00307 at 331.436 kb on + strand, within H281DRAFT_00307 at 331.437 kb on - strand, within H281DRAFT_00307 at 331.437 kb on - strand, within H281DRAFT_00307 at 331.437 kb on - strand, within H281DRAFT_00307 at 331.469 kb on + strand, within H281DRAFT_00307 at 331.469 kb on + strand, within H281DRAFT_00307 at 331.470 kb on - strand, within H281DRAFT_00307 at 331.526 kb on + strand, within H281DRAFT_00307 at 331.526 kb on + strand, within H281DRAFT_00307 at 331.526 kb on + strand, within H281DRAFT_00307 at 331.527 kb on - strand, within H281DRAFT_00307 at 331.527 kb on - strand, within H281DRAFT_00307 at 331.527 kb on - strand, within H281DRAFT_00307 at 331.741 kb on + strand, within H281DRAFT_00307 at 331.961 kb on - strand at 332.015 kb on + strand at 332.015 kb on + strand at 332.016 kb on - strand at 332.139 kb on + strand at 332.203 kb on - strand at 332.511 kb on + strand at 332.748 kb on + strand at 332.749 kb on - strand, within H281DRAFT_00308 at 332.749 kb on - strand, within H281DRAFT_00308 at 332.749 kb on - strand, within H281DRAFT_00308 at 333.057 kb on + strand, within H281DRAFT_00308 at 333.058 kb on - strand, within H281DRAFT_00308 at 333.058 kb on - strand, within H281DRAFT_00308 at 333.058 kb on - strand, within H281DRAFT_00308 at 333.077 kb on + strand, within H281DRAFT_00308 at 333.077 kb on + strand, within H281DRAFT_00308 at 333.078 kb on - strand, within H281DRAFT_00308 at 333.199 kb on + strand, within H281DRAFT_00308 at 333.200 kb on - strand, within H281DRAFT_00308 at 333.442 kb on - strand, within H281DRAFT_00308 at 333.747 kb on + strand at 333.747 kb on + strand at 333.938 kb on + strand at 334.209 kb on - strand, within H281DRAFT_00309 at 334.238 kb on + strand, within H281DRAFT_00309 at 334.351 kb on + strand, within H281DRAFT_00309 at 334.352 kb on - strand, within H281DRAFT_00309 at 334.367 kb on + strand, within H281DRAFT_00309 at 334.367 kb on + strand, within H281DRAFT_00309 at 334.368 kb on - strand, within H281DRAFT_00309 at 334.569 kb on + strand, within H281DRAFT_00309 at 334.570 kb on - strand, within H281DRAFT_00309 at 334.710 kb on - strand, within H281DRAFT_00309 at 334.710 kb on - strand, within H281DRAFT_00309 at 334.710 kb on - strand, within H281DRAFT_00309 at 334.710 kb on - strand, within H281DRAFT_00309
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 331,436 + H281DRAFT_00307 0.56 -0.2 331,436 + H281DRAFT_00307 0.56 +0.4 331,436 + H281DRAFT_00307 0.56 +0.2 331,437 - H281DRAFT_00307 0.56 +0.2 331,437 - H281DRAFT_00307 0.56 -0.7 331,437 - H281DRAFT_00307 0.56 -1.0 331,469 + H281DRAFT_00307 0.58 +0.5 331,469 + H281DRAFT_00307 0.58 -1.7 331,470 - H281DRAFT_00307 0.58 +1.0 331,526 + H281DRAFT_00307 0.62 +0.3 331,526 + H281DRAFT_00307 0.62 +1.0 331,526 + H281DRAFT_00307 0.62 +1.0 331,527 - H281DRAFT_00307 0.62 +0.2 331,527 - H281DRAFT_00307 0.62 -2.6 331,527 - H281DRAFT_00307 0.62 +0.7 331,741 + H281DRAFT_00307 0.77 +0.7 331,961 - +0.4 332,015 + -0.6 332,015 + +1.5 332,016 - -1.8 332,139 + +0.1 332,203 - +0.4 332,511 + -0.6 332,748 + +1.0 332,749 - H281DRAFT_00308 0.22 -0.5 332,749 - H281DRAFT_00308 0.22 -0.7 332,749 - H281DRAFT_00308 0.22 -1.8 333,057 + H281DRAFT_00308 0.44 -1.7 333,058 - H281DRAFT_00308 0.44 +0.1 333,058 - H281DRAFT_00308 0.44 +2.6 333,058 - H281DRAFT_00308 0.44 -3.0 333,077 + H281DRAFT_00308 0.45 -1.7 333,077 + H281DRAFT_00308 0.45 -1.6 333,078 - H281DRAFT_00308 0.45 -1.4 333,199 + H281DRAFT_00308 0.53 -1.7 333,200 - H281DRAFT_00308 0.53 -0.5 333,442 - H281DRAFT_00308 0.70 -2.3 333,747 + -1.8 333,747 + -0.6 333,938 + -0.3 334,209 - H281DRAFT_00309 0.20 +0.3 334,238 + H281DRAFT_00309 0.23 +0.2 334,351 + H281DRAFT_00309 0.35 +0.7 334,352 - H281DRAFT_00309 0.35 -0.2 334,367 + H281DRAFT_00309 0.37 +1.6 334,367 + H281DRAFT_00309 0.37 +0.6 334,368 - H281DRAFT_00309 0.37 +0.9 334,569 + H281DRAFT_00309 0.58 +0.9 334,570 - H281DRAFT_00309 0.58 -0.4 334,710 - H281DRAFT_00309 0.72 -2.0 334,710 - H281DRAFT_00309 0.72 +0.3 334,710 - H281DRAFT_00309 0.72 -0.9 334,710 - H281DRAFT_00309 0.72 +0.8
Or see this region's nucleotide sequence