Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00273 and H281DRAFT_00274 are separated by 149 nucleotides H281DRAFT_00274 and H281DRAFT_00275 are separated by 140 nucleotides H281DRAFT_00275 and H281DRAFT_00276 are separated by 280 nucleotides
H281DRAFT_00273: H281DRAFT_00273 - DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain, at 291,510 to 292,961
_00273
H281DRAFT_00274: H281DRAFT_00274 - molecular chaperone HtpG, at 293,111 to 295,009
_00274
H281DRAFT_00275: H281DRAFT_00275 - hypothetical protein, at 295,150 to 295,419
_00275
H281DRAFT_00276: H281DRAFT_00276 - Tfp pilus assembly protein PilF, at 295,700 to 297,592
_00276
Position (kb) 293
294
295
296 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 292.122 kb on + strand, within H281DRAFT_00273 at 292.221 kb on + strand, within H281DRAFT_00273 at 292.221 kb on + strand, within H281DRAFT_00273 at 292.222 kb on - strand, within H281DRAFT_00273 at 292.223 kb on + strand, within H281DRAFT_00273 at 292.405 kb on - strand, within H281DRAFT_00273 at 292.617 kb on + strand, within H281DRAFT_00273 at 292.981 kb on + strand at 292.982 kb on - strand at 293.855 kb on + strand, within H281DRAFT_00274 at 293.856 kb on - strand, within H281DRAFT_00274 at 293.856 kb on - strand, within H281DRAFT_00274 at 293.856 kb on - strand, within H281DRAFT_00274 at 293.867 kb on + strand, within H281DRAFT_00274 at 293.939 kb on + strand, within H281DRAFT_00274 at 293.954 kb on + strand, within H281DRAFT_00274 at 293.954 kb on + strand, within H281DRAFT_00274 at 293.955 kb on - strand, within H281DRAFT_00274 at 294.242 kb on + strand, within H281DRAFT_00274 at 294.243 kb on - strand, within H281DRAFT_00274 at 294.243 kb on - strand, within H281DRAFT_00274 at 294.317 kb on - strand, within H281DRAFT_00274 at 294.422 kb on + strand, within H281DRAFT_00274 at 294.422 kb on + strand, within H281DRAFT_00274 at 294.423 kb on - strand, within H281DRAFT_00274 at 294.776 kb on + strand, within H281DRAFT_00274 at 295.045 kb on - strand at 295.442 kb on + strand at 295.442 kb on + strand at 295.443 kb on - strand at 295.460 kb on + strand at 295.540 kb on + strand at 295.541 kb on - strand at 295.563 kb on - strand at 295.901 kb on + strand, within H281DRAFT_00276
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 292,122 + H281DRAFT_00273 0.42 -0.5 292,221 + H281DRAFT_00273 0.49 -1.6 292,221 + H281DRAFT_00273 0.49 +0.2 292,222 - H281DRAFT_00273 0.49 -0.3 292,223 + H281DRAFT_00273 0.49 +0.3 292,405 - H281DRAFT_00273 0.62 +0.3 292,617 + H281DRAFT_00273 0.76 +1.5 292,981 + -0.0 292,982 - -2.1 293,855 + H281DRAFT_00274 0.39 -3.4 293,856 - H281DRAFT_00274 0.39 -2.5 293,856 - H281DRAFT_00274 0.39 -0.4 293,856 - H281DRAFT_00274 0.39 -0.9 293,867 + H281DRAFT_00274 0.40 -1.4 293,939 + H281DRAFT_00274 0.44 +0.1 293,954 + H281DRAFT_00274 0.44 -3.5 293,954 + H281DRAFT_00274 0.44 -1.1 293,955 - H281DRAFT_00274 0.44 -2.7 294,242 + H281DRAFT_00274 0.60 -2.8 294,243 - H281DRAFT_00274 0.60 -3.5 294,243 - H281DRAFT_00274 0.60 -2.3 294,317 - H281DRAFT_00274 0.64 -2.8 294,422 + H281DRAFT_00274 0.69 -2.9 294,422 + H281DRAFT_00274 0.69 -3.1 294,423 - H281DRAFT_00274 0.69 -0.5 294,776 + H281DRAFT_00274 0.88 -0.2 295,045 - -1.1 295,442 + -0.6 295,442 + +0.4 295,443 - +0.3 295,460 + -0.0 295,540 + -0.9 295,541 - -1.3 295,563 - -2.0 295,901 + H281DRAFT_00276 0.11 -0.8
Or see this region's nucleotide sequence