Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00195 and H281DRAFT_00196 are separated by 173 nucleotides H281DRAFT_00196 and H281DRAFT_00197 are separated by 54 nucleotides H281DRAFT_00197 and H281DRAFT_00198 are separated by 422 nucleotides
H281DRAFT_00195: H281DRAFT_00195 - transcriptional regulator, XRE family, at 209,575 to 210,399
_00195
H281DRAFT_00196: H281DRAFT_00196 - Ubiquinone/menaquinone biosynthesis C-methylase UbiE, at 210,573 to 211,325
_00196
H281DRAFT_00197: H281DRAFT_00197 - Phosphoenolpyruvate carboxylase, type 1, at 211,380 to 214,589
_00197
H281DRAFT_00198: H281DRAFT_00198 - hydroxymethylbilane synthase, at 215,012 to 216,049
_00198
Position (kb) 211
212
213
214
215 Strain fitness (log2 ratio) -2
-1
0
1
2 at 210.429 kb on + strand at 210.429 kb on + strand at 210.430 kb on - strand at 210.442 kb on - strand at 210.477 kb on - strand at 210.568 kb on + strand at 210.625 kb on - strand at 210.778 kb on - strand, within H281DRAFT_00196 at 210.874 kb on + strand, within H281DRAFT_00196 at 211.040 kb on + strand, within H281DRAFT_00196 at 211.040 kb on + strand, within H281DRAFT_00196 at 211.041 kb on - strand, within H281DRAFT_00196 at 211.077 kb on - strand, within H281DRAFT_00196 at 211.274 kb on - strand at 211.274 kb on - strand at 211.499 kb on + strand at 211.499 kb on + strand at 211.500 kb on - strand at 211.604 kb on + strand at 211.849 kb on + strand, within H281DRAFT_00197 at 211.850 kb on - strand, within H281DRAFT_00197 at 212.054 kb on - strand, within H281DRAFT_00197 at 212.287 kb on + strand, within H281DRAFT_00197 at 212.288 kb on - strand, within H281DRAFT_00197 at 212.392 kb on + strand, within H281DRAFT_00197 at 212.695 kb on + strand, within H281DRAFT_00197 at 212.695 kb on + strand, within H281DRAFT_00197 at 212.695 kb on + strand, within H281DRAFT_00197 at 212.695 kb on + strand, within H281DRAFT_00197 at 212.792 kb on - strand, within H281DRAFT_00197 at 212.869 kb on + strand, within H281DRAFT_00197 at 213.187 kb on + strand, within H281DRAFT_00197 at 213.188 kb on - strand, within H281DRAFT_00197 at 213.340 kb on + strand, within H281DRAFT_00197 at 213.544 kb on + strand, within H281DRAFT_00197 at 213.544 kb on + strand, within H281DRAFT_00197 at 213.651 kb on - strand, within H281DRAFT_00197 at 213.851 kb on - strand, within H281DRAFT_00197 at 213.952 kb on + strand, within H281DRAFT_00197 at 213.952 kb on + strand, within H281DRAFT_00197 at 213.952 kb on + strand, within H281DRAFT_00197 at 213.952 kb on + strand, within H281DRAFT_00197 at 213.952 kb on + strand, within H281DRAFT_00197 at 213.953 kb on - strand, within H281DRAFT_00197 at 214.144 kb on + strand, within H281DRAFT_00197 at 214.144 kb on + strand, within H281DRAFT_00197 at 214.621 kb on + strand at 214.637 kb on - strand at 214.690 kb on + strand at 214.691 kb on - strand at 214.691 kb on - strand at 214.981 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 210,429 + -0.6 210,429 + -0.2 210,430 - -0.3 210,442 - -0.1 210,477 - +0.1 210,568 + +0.6 210,625 - -0.7 210,778 - H281DRAFT_00196 0.27 +0.7 210,874 + H281DRAFT_00196 0.40 -0.6 211,040 + H281DRAFT_00196 0.62 +0.3 211,040 + H281DRAFT_00196 0.62 -0.7 211,041 - H281DRAFT_00196 0.62 +0.2 211,077 - H281DRAFT_00196 0.67 -1.0 211,274 - +0.5 211,274 - -0.9 211,499 + -0.0 211,499 + +2.4 211,500 - -0.3 211,604 + -1.3 211,849 + H281DRAFT_00197 0.15 +0.2 211,850 - H281DRAFT_00197 0.15 +0.5 212,054 - H281DRAFT_00197 0.21 -0.4 212,287 + H281DRAFT_00197 0.28 +1.0 212,288 - H281DRAFT_00197 0.28 -0.8 212,392 + H281DRAFT_00197 0.32 -0.5 212,695 + H281DRAFT_00197 0.41 +1.9 212,695 + H281DRAFT_00197 0.41 +0.4 212,695 + H281DRAFT_00197 0.41 +2.1 212,695 + H281DRAFT_00197 0.41 +0.7 212,792 - H281DRAFT_00197 0.44 +0.4 212,869 + H281DRAFT_00197 0.46 +0.5 213,187 + H281DRAFT_00197 0.56 +0.1 213,188 - H281DRAFT_00197 0.56 +0.1 213,340 + H281DRAFT_00197 0.61 -1.8 213,544 + H281DRAFT_00197 0.67 +0.7 213,544 + H281DRAFT_00197 0.67 -0.0 213,651 - H281DRAFT_00197 0.71 -1.5 213,851 - H281DRAFT_00197 0.77 -0.6 213,952 + H281DRAFT_00197 0.80 +0.5 213,952 + H281DRAFT_00197 0.80 -1.3 213,952 + H281DRAFT_00197 0.80 -0.4 213,952 + H281DRAFT_00197 0.80 -1.6 213,952 + H281DRAFT_00197 0.80 -0.0 213,953 - H281DRAFT_00197 0.80 +0.9 214,144 + H281DRAFT_00197 0.86 -0.6 214,144 + H281DRAFT_00197 0.86 +0.1 214,621 + +0.1 214,637 - -0.3 214,690 + +0.1 214,691 - +1.1 214,691 - +1.1 214,981 + +0.2
Or see this region's nucleotide sequence