Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2165

Experiment: Biofilm Wash/Settlers in Fresh BG11R in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm Wash/Settlers in Fresh BG11R in Test Tubes with Spin rep 1
2,246,060	+		Synpcc7942_2164	0.33	-2.2
2,246,061	-		Synpcc7942_2164	0.33	-2.8
2,246,117	+		Synpcc7942_2164	0.37	-0.3
2,246,130	-		Synpcc7942_2164	0.38	-0.5
2,246,133	+		Synpcc7942_2164	0.38	-2.6
2,246,133	+		Synpcc7942_2164	0.38	-1.2
2,246,133	+		Synpcc7942_2164	0.38	-0.4
2,246,133	+		Synpcc7942_2164	0.38	-0.7
2,246,133	+		Synpcc7942_2164	0.38	-1.0
2,246,133	+		Synpcc7942_2164	0.38	-0.7
2,246,133	+		Synpcc7942_2164	0.38	-2.5
2,246,140	-		Synpcc7942_2164	0.38	+0.5
2,246,141	-		Synpcc7942_2164	0.39	-0.7
2,246,141	-		Synpcc7942_2164	0.39	-1.0
2,246,141	-		Synpcc7942_2164	0.39	+1.0
2,246,141	-		Synpcc7942_2164	0.39	+2.6
2,246,141	-		Synpcc7942_2164	0.39	-0.9
2,246,149	-		Synpcc7942_2164	0.39	-0.9
2,246,151	-		Synpcc7942_2164	0.39	+0.0
2,246,151	-		Synpcc7942_2164	0.39	-0.5
2,246,173	+		Synpcc7942_2164	0.41	-2.2
2,246,181	-		Synpcc7942_2164	0.41	+0.3
2,246,181	-		Synpcc7942_2164	0.41	-0.5
2,246,190	+		Synpcc7942_2164	0.42	-0.4
2,246,195	+		Synpcc7942_2164	0.42	-2.0
2,246,203	-		Synpcc7942_2164	0.43	+0.0
2,246,218	+		Synpcc7942_2164	0.44	+1.3
2,246,218	+		Synpcc7942_2164	0.44	+0.0
2,246,258	+		Synpcc7942_2164	0.47	-1.6
2,246,260	+		Synpcc7942_2164	0.47	-0.8
2,246,277	-		Synpcc7942_2164	0.48	-1.6
2,246,282	+		Synpcc7942_2164	0.49	-0.8
2,246,305	-		Synpcc7942_2164	0.50	-0.3
2,246,307	+		Synpcc7942_2164	0.51	-0.8
2,246,322	+		Synpcc7942_2164	0.52	+0.1
2,246,343	+		Synpcc7942_2164	0.53	+1.4
2,246,343	+		Synpcc7942_2164	0.53	-0.8
2,246,349	+		Synpcc7942_2164	0.54	+1.0
2,246,350	+		Synpcc7942_2164	0.54	+0.0
2,246,357	-		Synpcc7942_2164	0.54	-1.2
2,246,357	-		Synpcc7942_2164	0.54	-3.0
2,246,358	-		Synpcc7942_2164	0.54	-0.4
2,246,372	-		Synpcc7942_2164	0.55	+1.7
2,246,382	-		Synpcc7942_2164	0.56	-0.3
2,246,386	+		Synpcc7942_2164	0.56	-2.8
2,246,386	+		Synpcc7942_2164	0.56	-0.7
2,246,386	+		Synpcc7942_2164	0.56	-0.2
2,246,386	+		Synpcc7942_2164	0.56	-1.0
2,246,386	+		Synpcc7942_2164	0.56	+2.0
2,246,394	-		Synpcc7942_2164	0.57	-0.3
2,246,474	-		Synpcc7942_2164	0.63	-0.9
2,246,474	-		Synpcc7942_2164	0.63	-0.8
2,246,515	-		Synpcc7942_2164	0.66	-1.4
2,246,519	+		Synpcc7942_2164	0.66	-1.0
2,246,558	-		Synpcc7942_2164	0.69	+1.0
2,246,558	-		Synpcc7942_2164	0.69	+0.2
2,246,588	+		Synpcc7942_2164	0.71	-1.2
2,246,588	+		Synpcc7942_2164	0.71	-2.3
2,246,591	-		Synpcc7942_2164	0.71	-0.7
2,246,596	-		Synpcc7942_2164	0.71	+1.0
2,246,641	-		Synpcc7942_2164	0.75	-0.4
2,246,662	-		Synpcc7942_2164	0.76	-2.0
2,246,720	+		Synpcc7942_2164	0.80	-0.7
2,246,739	+		Synpcc7942_2164	0.82	+0.0
2,246,745	-		Synpcc7942_2164	0.82	-2.3
2,246,745	-		Synpcc7942_2164	0.82	-0.5
2,246,745	-		Synpcc7942_2164	0.82	-0.1
2,246,747	-		Synpcc7942_2164	0.82	+1.0
2,246,752	-		Synpcc7942_2164	0.83	+1.0
2,246,762	-		Synpcc7942_2164	0.83	+0.3
2,246,791	+				-1.3
2,246,832	-		Synpcc7942_2164	0.88	+1.0
2,246,845	-		Synpcc7942_2164	0.89	-1.2
2,246,846	-		Synpcc7942_2164	0.89	+2.0
2,246,862	-				+1.0
2,246,899	+				+1.0
2,246,925	+				+2.0
2,246,925	-				-2.0
2,246,925	-				-2.6
2,246,933	-				-2.7
2,246,954	-				-1.7
2,246,954	-				-1.0
2,246,964	-				-0.9
2,246,966	-				-0.6
2,247,045	-				-2.9
2,247,081	+		Synpcc7942_2165	0.24	-0.9
2,247,087	+		Synpcc7942_2165	0.26	-0.6
2,247,094	+		Synpcc7942_2165	0.28	-0.9
2,247,094	+		Synpcc7942_2165	0.28	+1.0
2,247,094	+		Synpcc7942_2165	0.28	-2.2
2,247,094	+		Synpcc7942_2165	0.28	-0.7
2,247,102	-		Synpcc7942_2165	0.30	+0.1
2,247,102	-		Synpcc7942_2165	0.30	+0.5
2,247,102	-		Synpcc7942_2165	0.30	-1.0
2,247,102	-		Synpcc7942_2165	0.30	-0.3
2,247,182	-		Synpcc7942_2165	0.51	-0.2
2,247,193	+		Synpcc7942_2165	0.54	-0.2
2,247,193	-		Synpcc7942_2165	0.54	-1.2
2,247,193	-		Synpcc7942_2165	0.54	+1.0
2,247,203	-		Synpcc7942_2165	0.56	+0.6
2,247,216	+		Synpcc7942_2165	0.60	-1.1
2,247,224	-		Synpcc7942_2165	0.62	-0.9
2,247,226	+		Synpcc7942_2165	0.62	+0.2
2,247,233	+		Synpcc7942_2165	0.64	+0.0
2,247,240	+		Synpcc7942_2165	0.66	-0.6
2,247,248	-		Synpcc7942_2165	0.68	+0.0
2,247,248	-		Synpcc7942_2165	0.68	+0.0
2,247,248	-		Synpcc7942_2165	0.68	-1.9
2,247,270	-		Synpcc7942_2165	0.74	-0.4
2,247,297	-		Synpcc7942_2165	0.81	+1.0
2,247,307	+		Synpcc7942_2165	0.83	+1.0
2,247,315	-		Synpcc7942_2165	0.86	+0.4
2,247,329	+		Synpcc7942_2165	0.89	-1.0
2,247,331	-		Synpcc7942_2165	0.90	-0.9
2,247,333	+				-0.9
2,247,357	+				+1.0
2,247,365	-				+0.4
2,247,401	+				-1.9
2,247,401	+				-0.4
2,247,409	-				-1.1
2,247,409	-				-1.4
2,247,409	-				+1.4
2,247,413	+				+0.0
2,247,413	+				+0.7
2,247,421	-				+1.2
2,247,421	-				-1.7
2,247,421	-				+0.0
2,247,421	-				-1.8
2,247,421	-				+0.6
2,247,431	-				-0.7
2,247,468	+				+1.0
2,247,469	+				-1.0
2,247,494	-				-0.4
2,247,567	+		Synpcc7942_2166	0.22	-1.0
2,247,567	+		Synpcc7942_2166	0.22	-1.8
2,247,567	+		Synpcc7942_2166	0.22	-1.8
2,247,567	+				+0.6
2,247,575	-		Synpcc7942_2166	0.24	+0.0
2,247,575	-		Synpcc7942_2166	0.24	-0.2
2,247,575	-		Synpcc7942_2166	0.24	+1.5
2,247,575	-		Synpcc7942_2166	0.24	-1.2
2,247,581	-		Synpcc7942_2166	0.26	-2.5
2,247,602	-		Synpcc7942_2166	0.31	-0.9
2,247,609	+		Synpcc7942_2166	0.33	-0.6
2,247,615	+				-1.0
2,247,623	+		Synpcc7942_2166	0.37	-1.1
2,247,623	+		Synpcc7942_2166	0.37	+0.5
2,247,623	+		Synpcc7942_2166	0.37	+1.0
2,247,631	-		Synpcc7942_2166	0.39	-2.0
2,247,631	-		Synpcc7942_2166	0.39	-0.9
2,247,631	-		Synpcc7942_2166	0.39	-1.3
2,247,653	-		Synpcc7942_2166	0.45	+2.6
2,247,655	+		Synpcc7942_2166	0.45	-1.8
2,247,663	-		Synpcc7942_2166	0.48	-0.6
2,247,719	-		Synpcc7942_2166	0.63	-0.6
2,247,728	-		Synpcc7942_2166	0.65	-0.6
2,247,730	+		Synpcc7942_2166	0.66	-1.8
2,247,730	+		Synpcc7942_2166	0.66	+0.4
2,247,730	+		Synpcc7942_2166	0.66	-0.4
2,247,730	+		Synpcc7942_2166	0.66	-2.3
2,247,730	+		Synpcc7942_2166	0.66	+2.0
2,247,730	+		Synpcc7942_2166	0.66	+0.6
2,247,738	+		Synpcc7942_2166	0.68	+1.6
2,247,738	-		Synpcc7942_2166	0.68	-1.6
2,247,738	-		Synpcc7942_2166	0.68	-1.9
2,247,738	-		Synpcc7942_2166	0.68	+1.0
2,247,738	-		Synpcc7942_2166	0.68	-1.4
2,247,738	-		Synpcc7942_2166	0.68	-0.8
2,247,738	-		Synpcc7942_2166	0.68	-1.3
2,247,738	-		Synpcc7942_2166	0.68	-1.0
2,247,739	+				+0.4
2,247,739	+		Synpcc7942_2166	0.68	+1.0
2,247,745	-		Synpcc7942_2166	0.70	+0.0
2,247,746	-		Synpcc7942_2166	0.70	+1.0
2,247,747	-		Synpcc7942_2166	0.70	+1.7
2,247,763	+		Synpcc7942_2166	0.74	-1.0
2,247,765	+		Synpcc7942_2166	0.75	+0.3
2,247,768	-		Synpcc7942_2166	0.76	-1.2
2,247,771	-		Synpcc7942_2166	0.77	-1.7
2,247,804	+		Synpcc7942_2166	0.85	-1.0
2,247,805	+		Synpcc7942_2166	0.86	-2.5
2,247,809	+		Synpcc7942_2166	0.87	-2.0
2,247,869	-				+0.0
2,247,873	-				-0.4
2,247,874	-				-0.6
2,247,879	+				+0.7
2,247,899	+				-0.6
2,247,902	-				-2.0
2,247,904	-				-0.8
2,247,916	+				-0.2
2,247,916	+				-1.1
2,247,924	-				+0.5
2,247,940	-				+0.6
2,247,940	-				-2.8
2,247,952	+				-1.2
2,247,952	+				+1.4
2,247,952	+				+0.0
2,247,974	-				+1.0
2,247,984	-				+1.6
2,247,986	+				-0.6
2,247,986	+				+0.0
2,248,023	+				+0.0
2,248,102	+		Synpcc7942_2167	0.19	-1.1
2,248,102	+		Synpcc7942_2167	0.19	-2.0
2,248,132	+		Synpcc7942_2167	0.26	+1.0
2,248,135	-		Synpcc7942_2167	0.26	-1.6
2,248,140	-		Synpcc7942_2167	0.27	-1.9
2,248,156	+		Synpcc7942_2167	0.31	-0.7
2,248,163	+		Synpcc7942_2167	0.32	-0.9
2,248,205	-		Synpcc7942_2167	0.42	+1.4
2,248,209	+		Synpcc7942_2167	0.43	-0.4
2,248,212	-				-0.8
2,248,224	-		Synpcc7942_2167	0.46	-0.4
2,248,226	+		Synpcc7942_2167	0.46	+1.0
2,248,276	+		Synpcc7942_2167	0.57	+0.4
2,248,284	-		Synpcc7942_2167	0.59	+0.6
2,248,305	+		Synpcc7942_2167	0.64	+1.7
2,248,352	+		Synpcc7942_2167	0.74	-1.1
2,248,362	+		Synpcc7942_2167	0.76	-0.2
2,248,362	-		Synpcc7942_2167	0.76	+1.0
2,248,369	-		Synpcc7942_2167	0.78	-1.0