Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1780

Experiment: Biofilm Wash/Settlers in Fresh BG11R in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm Wash/Settlers in Fresh BG11R in Test Tubes with Spin rep 1
1,844,807	+	recN	Synpcc7942_1779	0.50	-0.8
1,844,826	+	recN	Synpcc7942_1779	0.51	+0.4
1,844,826	+	recN	Synpcc7942_1779	0.51	-0.7
1,844,826	+	recN	Synpcc7942_1779	0.51	-1.1
1,844,826	+	recN	Synpcc7942_1779	0.51	+1.0
1,844,828	+	recN	Synpcc7942_1779	0.51	+1.0
1,844,834	+				-0.0
1,844,834	-				+1.0
1,844,834	-	recN	Synpcc7942_1779	0.51	-0.8
1,844,834	-	recN	Synpcc7942_1779	0.51	-0.9
1,844,834	-	recN	Synpcc7942_1779	0.51	-0.5
1,844,834	-	recN	Synpcc7942_1779	0.51	+0.6
1,844,834	-	recN	Synpcc7942_1779	0.51	+1.4
1,844,910	+	recN	Synpcc7942_1779	0.55	+1.0
1,844,913	-	recN	Synpcc7942_1779	0.56	-0.7
1,844,918	-	recN	Synpcc7942_1779	0.56	-1.5
1,844,922	+	recN	Synpcc7942_1779	0.56	+0.3
1,844,929	+	recN	Synpcc7942_1779	0.57	-2.5
1,844,941	+	recN	Synpcc7942_1779	0.57	-0.3
1,844,943	+	recN	Synpcc7942_1779	0.57	+0.4
1,844,989	+	recN	Synpcc7942_1779	0.60	-2.0
1,844,989	+	recN	Synpcc7942_1779	0.60	-0.0
1,844,990	+	recN	Synpcc7942_1779	0.60	-1.6
1,845,027	-	recN	Synpcc7942_1779	0.62	-0.4
1,845,054	+	recN	Synpcc7942_1779	0.64	+0.6
1,845,079	+	recN	Synpcc7942_1779	0.65	-0.2
1,845,087	-	recN	Synpcc7942_1779	0.66	-0.3
1,845,144	+	recN	Synpcc7942_1779	0.69	+1.0
1,845,170	-	recN	Synpcc7942_1779	0.70	-4.4
1,845,178	+	recN	Synpcc7942_1779	0.71	+2.2
1,845,254	-	recN	Synpcc7942_1779	0.75	-0.6
1,845,280	+	recN	Synpcc7942_1779	0.77	+0.4
1,845,318	+	recN	Synpcc7942_1779	0.79	+0.2
1,845,318	+	recN	Synpcc7942_1779	0.79	-0.6
1,845,326	-	recN	Synpcc7942_1779	0.79	+1.0
1,845,343	-	recN	Synpcc7942_1779	0.80	+1.0
1,845,350	+	recN	Synpcc7942_1779	0.81	+2.6
1,845,353	-	recN	Synpcc7942_1779	0.81	+1.0
1,845,403	+	recN	Synpcc7942_1779	0.84	-1.2
1,845,434	-	recN	Synpcc7942_1779	0.86	+1.6
1,845,458	+	recN	Synpcc7942_1779	0.87	-0.3
1,845,479	+	recN	Synpcc7942_1779	0.88	-0.3
1,845,479	+	recN	Synpcc7942_1779	0.88	-1.2
1,845,614	+				-0.8
1,845,661	+				-2.5
1,845,675	+				-2.7
1,845,678	-				-1.3
1,845,683	-				-1.2
1,845,683	-				-0.8
1,845,690	-				-0.4
1,845,693	-				-1.1
1,845,717	+				-0.9
1,845,747	-				+0.2
1,845,795	+				+1.0
1,845,813	-				-1.8
1,845,815	-				-0.9
1,845,848	-				+1.7
1,845,859	-				-1.2
1,845,902	-				-0.8
1,845,914	-				+1.6
1,845,914	-				-1.2
1,845,924	-	mutL	Synpcc7942_1780	0.10	+0.1
1,845,954	-	mutL	Synpcc7942_1780	0.12	-0.5
1,845,982	+	mutL	Synpcc7942_1780	0.14	-0.6
1,845,982	+	mutL	Synpcc7942_1780	0.14	-2.7
1,845,988	+	mutL	Synpcc7942_1780	0.14	+1.1
1,845,995	-	mutL	Synpcc7942_1780	0.14	-0.8
1,845,996	-	mutL	Synpcc7942_1780	0.15	-2.6
1,846,044	-	mutL	Synpcc7942_1780	0.17	-0.9
1,846,057	+	mutL	Synpcc7942_1780	0.18	+2.0
1,846,062	-	mutL	Synpcc7942_1780	0.19	+1.0
1,846,064	+	mutL	Synpcc7942_1780	0.19	+1.0
1,846,064	+	mutL	Synpcc7942_1780	0.19	-1.8
1,846,064	+	mutL	Synpcc7942_1780	0.19	-0.3
1,846,064	+	mutL	Synpcc7942_1780	0.19	-0.0
1,846,064	+	mutL	Synpcc7942_1780	0.19	+0.5
1,846,065	-	mutL	Synpcc7942_1780	0.19	-1.0
1,846,072	-	mutL	Synpcc7942_1780	0.19	-0.5
1,846,072	-	mutL	Synpcc7942_1780	0.19	-1.4
1,846,072	-	mutL	Synpcc7942_1780	0.19	-1.4
1,846,072	-	mutL	Synpcc7942_1780	0.19	-0.4
1,846,152	+	mutL	Synpcc7942_1780	0.24	-1.8
1,846,160	-	mutL	Synpcc7942_1780	0.25	-0.9
1,846,185	+	mutL	Synpcc7942_1780	0.26	+1.0
1,846,203	-	mutL	Synpcc7942_1780	0.27	+1.1
1,846,209	-	mutL	Synpcc7942_1780	0.28	+1.6
1,846,223	+				-0.6
1,846,223	+	mutL	Synpcc7942_1780	0.28	-0.6
1,846,229	+	mutL	Synpcc7942_1780	0.29	+0.1
1,846,229	+	mutL	Synpcc7942_1780	0.29	+1.2
1,846,231	-	mutL	Synpcc7942_1780	0.29	+1.0
1,846,231	-	mutL	Synpcc7942_1780	0.29	-0.2
1,846,263	+	mutL	Synpcc7942_1780	0.31	+0.2
1,846,329	-	mutL	Synpcc7942_1780	0.35	-0.0
1,846,344	+	mutL	Synpcc7942_1780	0.36	+1.3
1,846,344	+	mutL	Synpcc7942_1780	0.36	+1.0
1,846,344	+	mutL	Synpcc7942_1780	0.36	-2.2
1,846,363	-	mutL	Synpcc7942_1780	0.37	-0.1
1,846,381	-	mutL	Synpcc7942_1780	0.38	-0.0
1,846,383	-	mutL	Synpcc7942_1780	0.38	-1.9
1,846,401	+	mutL	Synpcc7942_1780	0.39	-0.8
1,846,401	+	mutL	Synpcc7942_1780	0.39	-0.0
1,846,401	+	mutL	Synpcc7942_1780	0.39	+1.3
1,846,401	+	mutL	Synpcc7942_1780	0.39	-0.7
1,846,406	+	mutL	Synpcc7942_1780	0.40	-1.8
1,846,409	-	mutL	Synpcc7942_1780	0.40	+2.6
1,846,409	-	mutL	Synpcc7942_1780	0.40	-2.5
1,846,414	-	mutL	Synpcc7942_1780	0.40	+1.4
1,846,415	-	mutL	Synpcc7942_1780	0.40	+1.0
1,846,436	+	mutL	Synpcc7942_1780	0.42	-2.1
1,846,436	+	mutL	Synpcc7942_1780	0.42	-1.2
1,846,464	-	mutL	Synpcc7942_1780	0.43	+1.0
1,846,464	-	mutL	Synpcc7942_1780	0.43	-0.6
1,846,523	-	mutL	Synpcc7942_1780	0.47	-0.0
1,846,523	-	mutL	Synpcc7942_1780	0.47	-0.3
1,846,523	-	mutL	Synpcc7942_1780	0.47	-1.5
1,846,528	+	mutL	Synpcc7942_1780	0.47	-0.3
1,846,528	+	mutL	Synpcc7942_1780	0.47	+1.9
1,846,535	+	mutL	Synpcc7942_1780	0.48	-0.3
1,846,563	-	mutL	Synpcc7942_1780	0.49	-1.2
1,846,563	-	mutL	Synpcc7942_1780	0.49	+0.5
1,846,585	+	mutL	Synpcc7942_1780	0.51	+0.5
1,846,620	-	mutL	Synpcc7942_1780	0.53	-1.3
1,846,647	-	mutL	Synpcc7942_1780	0.55	-1.7
1,846,671	+	mutL	Synpcc7942_1780	0.56	+1.6
1,846,671	+	mutL	Synpcc7942_1780	0.56	-0.7
1,846,679	-	mutL	Synpcc7942_1780	0.57	-0.3
1,846,681	+	mutL	Synpcc7942_1780	0.57	+1.0
1,846,685	-	mutL	Synpcc7942_1780	0.57	-0.6
1,846,690	+	mutL	Synpcc7942_1780	0.57	+1.2
1,846,701	+	mutL	Synpcc7942_1780	0.58	-0.8
1,846,784	+	mutL	Synpcc7942_1780	0.63	+0.4
1,846,789	+	mutL	Synpcc7942_1780	0.63	+1.2
1,846,811	+	mutL	Synpcc7942_1780	0.65	-1.1
1,846,831	-	mutL	Synpcc7942_1780	0.66	-1.2
1,846,941	+	mutL	Synpcc7942_1780	0.73	-0.0
1,846,948	-	mutL	Synpcc7942_1780	0.73	-0.2
1,846,950	+	mutL	Synpcc7942_1780	0.73	-2.1
1,846,985	+	mutL	Synpcc7942_1780	0.75	+1.0
1,846,986	+	mutL	Synpcc7942_1780	0.75	-1.4
1,847,022	+	mutL	Synpcc7942_1780	0.78	-0.6
1,847,022	+	mutL	Synpcc7942_1780	0.78	+1.4
1,847,030	-	mutL	Synpcc7942_1780	0.78	-0.6
1,847,098	+	mutL	Synpcc7942_1780	0.82	+4.1
1,847,107	-	mutL	Synpcc7942_1780	0.83	-2.7
1,847,109	+	mutL	Synpcc7942_1780	0.83	+0.1
1,847,133	+	mutL	Synpcc7942_1780	0.84	+0.3
1,847,133	+	mutL	Synpcc7942_1780	0.84	+1.3
1,847,162	+	mutL	Synpcc7942_1780	0.86	+1.0
1,847,219	+	mutL	Synpcc7942_1780	0.90	-1.2
1,847,219	+	mutL	Synpcc7942_1780	0.90	-0.6
1,847,219	+	mutL	Synpcc7942_1780	0.90	-2.4
1,847,222	-	mutL	Synpcc7942_1780	0.90	+1.0
1,847,222	-	mutL	Synpcc7942_1780	0.90	-0.6
1,847,222	-	mutL	Synpcc7942_1780	0.90	+2.0
1,847,222	-	mutL	Synpcc7942_1780	0.90	+2.6
1,847,227	-				-1.5
1,847,227	-				+1.1
1,847,227	-				-1.9
1,847,227	-				+0.1
1,847,256	+				-1.3
1,847,269	+				-0.5
1,847,274	+				+0.6
1,847,277	-				-0.6
1,847,277	-				-1.2
1,847,310	+				-2.1
1,847,311	+				+3.0
1,847,319	-				+1.4
1,847,380	+				-1.0
1,847,410	+				-0.7
1,847,866	+				-1.1
1,847,866	+				+0.6
1,847,868	+				-0.8