Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1216

Experiment: Biofilm Wash/Settlers in Fresh BG11R in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm Wash/Settlers in Fresh BG11R in Test Tubes with Spin rep 1
1,237,597	-				+0.0
1,237,602	+				+1.2
1,237,602	+				-0.9
1,237,602	+				+1.0
1,237,604	-				+2.0
1,237,610	-				-3.0
1,237,610	-				+2.0
1,237,610	-				+0.2
1,237,621	+				+1.0
1,237,649	-		Synpcc7942_1215	0.10	-0.4
1,237,651	-		Synpcc7942_1215	0.10	+2.0
1,237,690	+		Synpcc7942_1215	0.14	+1.0
1,237,708	+		Synpcc7942_1215	0.16	-1.0
1,237,716	-		Synpcc7942_1215	0.17	-0.5
1,237,717	-		Synpcc7942_1215	0.17	+2.0
1,237,717	-		Synpcc7942_1215	0.17	-1.3
1,237,738	-		Synpcc7942_1215	0.19	-0.7
1,237,748	-		Synpcc7942_1215	0.20	-2.4
1,237,807	+		Synpcc7942_1215	0.26	-1.4
1,237,810	-		Synpcc7942_1215	0.26	-1.3
1,237,823	+		Synpcc7942_1215	0.27	+1.0
1,237,823	+		Synpcc7942_1215	0.27	+1.0
1,237,825	+		Synpcc7942_1215	0.28	-1.1
1,237,826	-		Synpcc7942_1215	0.28	-0.8
1,237,838	+		Synpcc7942_1215	0.29	+0.7
1,237,840	+		Synpcc7942_1215	0.29	+0.7
1,237,843	-		Synpcc7942_1215	0.29	-0.6
1,237,848	+		Synpcc7942_1215	0.30	+1.3
1,237,852	+		Synpcc7942_1215	0.30	+1.3
1,237,868	+		Synpcc7942_1215	0.32	-0.6
1,237,868	+		Synpcc7942_1215	0.32	+0.5
1,237,868	+		Synpcc7942_1215	0.32	-1.9
1,237,871	+		Synpcc7942_1215	0.32	-0.5
1,237,880	+		Synpcc7942_1215	0.33	-0.3
1,237,909	+		Synpcc7942_1215	0.36	-0.8
1,237,951	-		Synpcc7942_1215	0.40	+1.0
1,237,965	+		Synpcc7942_1215	0.42	-2.0
1,237,988	+		Synpcc7942_1215	0.44	-0.9
1,238,017	+		Synpcc7942_1215	0.47	-0.9
1,238,027	+		Synpcc7942_1215	0.48	-0.5
1,238,065	+		Synpcc7942_1215	0.51	-0.7
1,238,074	+		Synpcc7942_1215	0.52	+1.5
1,238,087	+		Synpcc7942_1215	0.54	+2.3
1,238,102	+		Synpcc7942_1215	0.55	+0.0
1,238,105	-		Synpcc7942_1215	0.55	-1.7
1,238,125	+		Synpcc7942_1215	0.57	-0.9
1,238,132	+		Synpcc7942_1215	0.58	-0.6
1,238,200	-		Synpcc7942_1215	0.65	-0.7
1,238,221	+		Synpcc7942_1215	0.67	-0.8
1,238,221	+		Synpcc7942_1215	0.67	-1.0
1,238,221	+		Synpcc7942_1215	0.67	-3.4
1,238,229	-		Synpcc7942_1215	0.68	-0.9
1,238,229	-		Synpcc7942_1215	0.68	+1.0
1,238,241	-		Synpcc7942_1215	0.69	-0.4
1,238,244	+		Synpcc7942_1215	0.69	+0.0
1,238,249	+		Synpcc7942_1215	0.70	+0.0
1,238,249	+		Synpcc7942_1215	0.70	-0.2
1,238,249	+		Synpcc7942_1215	0.70	-0.4
1,238,252	-		Synpcc7942_1215	0.70	+3.0
1,238,256	+		Synpcc7942_1215	0.70	-1.5
1,238,257	-		Synpcc7942_1215	0.71	+1.0
1,238,257	-		Synpcc7942_1215	0.71	+1.0
1,238,257	-		Synpcc7942_1215	0.71	-2.4
1,238,257	-		Synpcc7942_1215	0.71	+1.8
1,238,257	-		Synpcc7942_1215	0.71	-2.8
1,238,257	-		Synpcc7942_1215	0.71	-0.7
1,238,257	-		Synpcc7942_1215	0.71	+0.1
1,238,259	+		Synpcc7942_1215	0.71	-0.5
1,238,264	-		Synpcc7942_1215	0.71	-0.4
1,238,279	-		Synpcc7942_1215	0.73	-2.2
1,238,335	+		Synpcc7942_1215	0.78	-2.4
1,238,343	-		Synpcc7942_1215	0.79	+1.0
1,238,343	-		Synpcc7942_1215	0.79	+0.5
1,238,369	-		Synpcc7942_1215	0.82	-0.9
1,238,369	-		Synpcc7942_1215	0.82	-0.6
1,238,384	+		Synpcc7942_1215	0.83	-1.0
1,238,386	-		Synpcc7942_1215	0.83	-0.7
1,238,391	-		Synpcc7942_1215	0.84	-1.5
1,238,392	-		Synpcc7942_1215	0.84	+1.0
1,238,402	+		Synpcc7942_1215	0.85	+0.1
1,238,456	+				+1.5
1,238,464	-				-0.3
1,238,489	-				+0.6
1,238,490	-				-0.3
1,238,518	-				-1.3
1,238,518	-				-0.3
1,238,548	+				-1.4
1,238,615	+				-0.1
1,239,155	+	kaiC	Synpcc7942_1216	0.39	-1.5
1,239,361	-				+0.0
1,239,461	-	kaiC	Synpcc7942_1216	0.58	+2.6
1,239,518	+	kaiC	Synpcc7942_1216	0.62	+1.0
1,239,523	+	kaiC	Synpcc7942_1216	0.62	-1.9
1,239,567	+	kaiC	Synpcc7942_1216	0.65	-0.5
1,239,567	+	kaiC	Synpcc7942_1216	0.65	+1.0
1,239,659	+	kaiC	Synpcc7942_1216	0.71	+0.0
1,239,755	+	kaiC	Synpcc7942_1216	0.77	-0.3
1,239,761	+	kaiC	Synpcc7942_1216	0.78	-0.5
1,239,770	-	kaiC	Synpcc7942_1216	0.78	+0.0
1,239,914	+	kaiC	Synpcc7942_1216	0.87	+1.0
1,240,261	+	kaiB	Synpcc7942_1217	0.33	+1.0
1,240,443	-				+1.0
1,240,463	+				+1.0
1,240,463	+				+1.6
1,240,543	-				+1.0
1,240,772	+	kaiA	Synpcc7942_1218	0.25	+0.0
1,240,827	+	kaiA	Synpcc7942_1218	0.32	-1.2
1,240,834	+	kaiA	Synpcc7942_1218	0.32	-1.0
1,240,907	+	kaiA	Synpcc7942_1218	0.41	-1.8
1,240,925	-	kaiA	Synpcc7942_1218	0.43	+1.7
1,240,934	-	kaiA	Synpcc7942_1218	0.44	-0.8
1,240,934	-	kaiA	Synpcc7942_1218	0.44	-0.2
1,240,936	-	kaiA	Synpcc7942_1218	0.44	+1.3
1,240,966	-	kaiA	Synpcc7942_1218	0.48	-1.1
1,240,972	+	kaiA	Synpcc7942_1218	0.49	-1.1
1,240,989	+	kaiA	Synpcc7942_1218	0.51	-0.2
1,241,021	-	kaiA	Synpcc7942_1218	0.54	-1.3
1,241,021	-	kaiA	Synpcc7942_1218	0.54	-1.1
1,241,048	+	kaiA	Synpcc7942_1218	0.57	+2.0
1,241,053	+	kaiA	Synpcc7942_1218	0.58	-1.6
1,241,056	-	kaiA	Synpcc7942_1218	0.58	+0.5
1,241,065	-	kaiA	Synpcc7942_1218	0.59	-0.5
1,241,065	-	kaiA	Synpcc7942_1218	0.59	-0.3
1,241,092	-	kaiA	Synpcc7942_1218	0.63	-0.2
1,241,097	+	kaiA	Synpcc7942_1218	0.63	-1.7
1,241,097	+	kaiA	Synpcc7942_1218	0.63	-0.7
1,241,100	-	kaiA	Synpcc7942_1218	0.64	-0.7
1,241,102	+	kaiA	Synpcc7942_1218	0.64	-1.6
1,241,102	+	kaiA	Synpcc7942_1218	0.64	+1.3