Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1165

Experiment: Biofilm Wash/Settlers in Fresh BG11R in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm Wash/Settlers in Fresh BG11R in Test Tubes with Spin rep 1
1,197,879	+		Synpcc7942_1164	0.32	+0.5
1,198,002	+		Synpcc7942_1164	0.41	-0.5
1,198,075	-		Synpcc7942_1164	0.46	+0.0
1,198,264	+		Synpcc7942_1164	0.59	+1.0
1,198,275	-		Synpcc7942_1164	0.60	-2.3
1,198,313	+				-1.1
1,198,538	+		Synpcc7942_1164	0.79	-1.3
1,198,546	-		Synpcc7942_1164	0.79	-2.4
1,198,556	-		Synpcc7942_1164	0.80	+0.5
1,198,728	+				+0.0
1,198,758	+				+0.5
1,198,758	+				+1.4
1,198,774	+				+1.0
1,198,910	+		Synpcc7942_1165	0.17	-0.8
1,198,920	-		Synpcc7942_1165	0.19	-1.8
1,198,993	+		Synpcc7942_1165	0.38	-0.3
1,198,993	+		Synpcc7942_1165	0.38	+1.3
1,199,015	+		Synpcc7942_1165	0.43	-1.2
1,199,023	-		Synpcc7942_1165	0.45	-0.7
1,199,023	-		Synpcc7942_1165	0.45	-1.1
1,199,023	-		Synpcc7942_1165	0.45	-1.6
1,199,183	+		Synpcc7942_1165	0.86	-2.7
1,199,215	-				+0.0
1,199,234	+				+0.0
1,199,251	+				+1.0
1,199,285	-				-2.0
1,199,396	+				-0.8
1,199,404	-				+0.5
1,199,423	+				-0.7
1,199,459	-				-1.9
1,199,490	+				-1.5
1,199,516	+				-1.0
1,199,532	+				+1.0
1,199,557	+				+0.3
1,199,566	-				+1.0
1,199,603	+		Synpcc7942_1166	0.13	+2.2
1,199,606	-		Synpcc7942_1166	0.13	+1.0
1,199,672	-		Synpcc7942_1166	0.18	+0.3
1,199,674	-		Synpcc7942_1166	0.18	-2.2
1,199,678	-		Synpcc7942_1166	0.18	+1.0
1,199,684	-		Synpcc7942_1166	0.19	-1.0
1,199,764	+		Synpcc7942_1166	0.25	-0.8
1,199,770	-		Synpcc7942_1166	0.25	-0.9
1,199,790	+		Synpcc7942_1166	0.27	+1.6
1,199,798	-				-1.8
1,199,798	-		Synpcc7942_1166	0.27	+3.0
1,199,833	+		Synpcc7942_1166	0.30	-0.8
1,199,833	+		Synpcc7942_1166	0.30	+0.1
1,199,835	+		Synpcc7942_1166	0.30	-0.2
1,199,841	-		Synpcc7942_1166	0.30	+1.3
1,199,843	-		Synpcc7942_1166	0.31	-2.3
1,199,843	-		Synpcc7942_1166	0.31	+1.0
1,199,856	-		Synpcc7942_1166	0.32	+0.5
1,199,892	+		Synpcc7942_1166	0.34	-0.1
1,199,897	+		Synpcc7942_1166	0.35	-1.5
1,199,902	+		Synpcc7942_1166	0.35	-1.0
1,199,907	+		Synpcc7942_1166	0.35	+0.3
1,199,962	-		Synpcc7942_1166	0.40	-1.5
1,199,998	+		Synpcc7942_1166	0.42	+0.0
1,200,064	-		Synpcc7942_1166	0.47	+2.0
1,200,064	-		Synpcc7942_1166	0.47	-2.8
1,200,064	-		Synpcc7942_1166	0.47	+0.4
1,200,140	+		Synpcc7942_1166	0.53	+1.3
1,200,161	-		Synpcc7942_1166	0.55	+0.5
1,200,201	-		Synpcc7942_1166	0.58	+0.0
1,200,207	-		Synpcc7942_1166	0.58	-0.6
1,200,208	-		Synpcc7942_1166	0.58	-0.6
1,200,225	-		Synpcc7942_1166	0.59	+1.0