Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1164

Experiment: Biofilm Wash/Settlers in Fresh BG11R in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm Wash/Settlers in Fresh BG11R in Test Tubes with Spin rep 1
1,196,478	-				+1.0
1,196,478	-				+0.1
1,196,478	-				+1.0
1,196,515	-				+0.6
1,196,532	+				-3.4
1,196,532	+				+0.3
1,196,639	+				+2.0
1,196,687	+				-1.0
1,196,695	-				-1.8
1,196,740	-				-1.5
1,196,812	+				-1.0
1,196,847	-				-0.3
1,196,947	-				-1.6
1,197,012	-				-0.5
1,197,139	+				+0.2
1,197,150	+				+1.6
1,197,156	+				-0.4
1,197,161	+				-0.4
1,197,217	-				+1.3
1,197,219	+				+1.2
1,197,318	+				+0.1
1,197,509	+				-0.6
1,197,700	+		Synpcc7942_1164	0.20	-1.3
1,197,714	+		Synpcc7942_1164	0.21	-0.9
1,197,745	+		Synpcc7942_1164	0.23	-1.5
1,197,794	-		Synpcc7942_1164	0.26	-3.4
1,197,794	-		Synpcc7942_1164	0.26	-2.0
1,197,794	-		Synpcc7942_1164	0.26	+0.0
1,197,805	+		Synpcc7942_1164	0.27	-0.4
1,197,879	+		Synpcc7942_1164	0.32	+0.5
1,198,002	+		Synpcc7942_1164	0.41	-0.5
1,198,075	-		Synpcc7942_1164	0.46	+0.0
1,198,264	+		Synpcc7942_1164	0.59	+1.0
1,198,275	-		Synpcc7942_1164	0.60	-2.3
1,198,313	+				-1.1
1,198,538	+		Synpcc7942_1164	0.79	-1.3
1,198,546	-		Synpcc7942_1164	0.79	-2.4
1,198,556	-		Synpcc7942_1164	0.80	+0.5
1,198,728	+				+0.0
1,198,758	+				+0.5
1,198,758	+				+1.4
1,198,774	+				+1.0
1,198,910	+		Synpcc7942_1165	0.17	-0.8
1,198,920	-		Synpcc7942_1165	0.19	-1.8
1,198,993	+		Synpcc7942_1165	0.38	-0.3
1,198,993	+		Synpcc7942_1165	0.38	+1.3
1,199,015	+		Synpcc7942_1165	0.43	-1.2
1,199,023	-		Synpcc7942_1165	0.45	-0.7
1,199,023	-		Synpcc7942_1165	0.45	-1.1
1,199,023	-		Synpcc7942_1165	0.45	-1.6
1,199,183	+		Synpcc7942_1165	0.86	-2.7
1,199,215	-				+0.0
1,199,234	+				+0.0
1,199,251	+				+1.0
1,199,285	-				-2.0
1,199,396	+				-0.8
1,199,404	-				+0.5
1,199,423	+				-0.7
1,199,459	-				-1.9
1,199,490	+				-1.5
1,199,516	+				-1.0
1,199,532	+				+1.0
1,199,557	+				+0.3
1,199,566	-				+1.0
1,199,603	+		Synpcc7942_1166	0.13	+2.2
1,199,606	-		Synpcc7942_1166	0.13	+1.0
1,199,672	-		Synpcc7942_1166	0.18	+0.3
1,199,674	-		Synpcc7942_1166	0.18	-2.2
1,199,678	-		Synpcc7942_1166	0.18	+1.0
1,199,684	-		Synpcc7942_1166	0.19	-1.0
1,199,764	+		Synpcc7942_1166	0.25	-0.8
1,199,770	-		Synpcc7942_1166	0.25	-0.9
1,199,790	+		Synpcc7942_1166	0.27	+1.6
1,199,798	-				-1.8
1,199,798	-		Synpcc7942_1166	0.27	+3.0
1,199,833	+		Synpcc7942_1166	0.30	-0.8
1,199,833	+		Synpcc7942_1166	0.30	+0.1
1,199,835	+		Synpcc7942_1166	0.30	-0.2
1,199,841	-		Synpcc7942_1166	0.30	+1.3