Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1129

Experiment: Biofilm Wash/Settlers in Fresh BG11R in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm Wash/Settlers in Fresh BG11R in Test Tubes with Spin rep 1
1,147,626	+		Synpcc7942_1128	0.25	+0.6
1,147,682	-		Synpcc7942_1128	0.31	-0.4
1,147,781	-		Synpcc7942_1128	0.40	-2.7
1,147,824	-		Synpcc7942_1128	0.44	-1.3
1,147,831	+		Synpcc7942_1128	0.44	-1.3
1,147,865	+		Synpcc7942_1128	0.47	+0.4
1,147,900	+		Synpcc7942_1128	0.51	-0.3
1,147,935	+		Synpcc7942_1128	0.54	-1.7
1,147,935	+		Synpcc7942_1128	0.54	+0.0
1,147,953	-		Synpcc7942_1128	0.55	-0.9
1,147,957	+		Synpcc7942_1128	0.56	-1.9
1,147,957	+		Synpcc7942_1128	0.56	+0.6
1,147,965	-		Synpcc7942_1128	0.57	+0.0
1,147,965	-		Synpcc7942_1128	0.57	-0.4
1,147,980	+		Synpcc7942_1128	0.58	-1.8
1,148,002	+		Synpcc7942_1128	0.60	-3.0
1,148,007	+		Synpcc7942_1128	0.60	-1.6
1,148,015	-		Synpcc7942_1128	0.61	+0.0
1,148,109	-		Synpcc7942_1128	0.70	+0.0
1,148,186	-		Synpcc7942_1128	0.77	+0.9
1,148,229	+		Synpcc7942_1128	0.81	+1.0
1,148,301	-		Synpcc7942_1128	0.87	+1.0
1,148,331	+				+2.0
1,148,362	+				+1.0
1,148,370	-				-0.6
1,148,370	-				-1.4
1,148,419	-				-1.5
1,148,434	-				+0.4
1,148,441	+				-0.9
1,148,454	-				-2.2
1,148,454	-				-0.9
1,148,470	-				-1.1
1,148,521	-				+1.0
1,148,523	-				+0.4
1,148,587	-				-0.6
1,148,613	+				+2.6
1,148,623	-				-1.6
1,148,638	+		Synpcc7942_1129	0.12	-1.1
1,148,688	+		Synpcc7942_1129	0.17	+0.4
1,148,706	+		Synpcc7942_1129	0.20	-1.0
1,148,706	+		Synpcc7942_1129	0.20	-2.1
1,148,714	-		Synpcc7942_1129	0.20	-2.2
1,148,726	+		Synpcc7942_1129	0.22	-1.0
1,148,732	-		Synpcc7942_1129	0.23	+0.6
1,148,792	+		Synpcc7942_1129	0.30	-1.1
1,148,800	-		Synpcc7942_1129	0.31	+1.6
1,148,864	+		Synpcc7942_1129	0.38	-1.0
1,148,887	+		Synpcc7942_1129	0.41	-1.4
1,148,903	-		Synpcc7942_1129	0.43	+2.4
1,148,905	-		Synpcc7942_1129	0.43	+0.0
1,148,917	+		Synpcc7942_1129	0.44	+0.0
1,148,925	-		Synpcc7942_1129	0.45	+1.0
1,148,930	+				-2.3
1,148,939	+		Synpcc7942_1129	0.47	+1.0
1,148,941	+		Synpcc7942_1129	0.47	-0.1
1,148,949	+		Synpcc7942_1129	0.48	-0.6
1,148,959	-		Synpcc7942_1129	0.49	-1.5
1,148,974	-		Synpcc7942_1129	0.51	+0.0
1,148,981	-		Synpcc7942_1129	0.52	-1.8
1,148,990	+		Synpcc7942_1129	0.53	-1.1
1,148,998	-		Synpcc7942_1129	0.54	-0.9
1,149,011	+		Synpcc7942_1129	0.55	-1.6
1,149,038	+		Synpcc7942_1129	0.59	+0.8
1,149,038	+		Synpcc7942_1129	0.59	+1.0
1,149,039	+		Synpcc7942_1129	0.59	-1.1
1,149,051	-		Synpcc7942_1129	0.60	-0.6
1,149,060	+		Synpcc7942_1129	0.61	-0.8
1,149,076	-		Synpcc7942_1129	0.63	-1.6
1,149,085	-		Synpcc7942_1129	0.64	-2.3
1,149,092	+		Synpcc7942_1129	0.65	-3.2
1,149,092	+		Synpcc7942_1129	0.65	+1.0
1,149,101	-		Synpcc7942_1129	0.66	-1.0
1,149,101	-		Synpcc7942_1129	0.66	-0.4
1,149,101	-		Synpcc7942_1129	0.66	-2.2
1,149,125	+		Synpcc7942_1129	0.69	-0.3
1,149,128	-		Synpcc7942_1129	0.69	+1.0
1,149,130	+		Synpcc7942_1129	0.69	+1.0
1,149,133	-		Synpcc7942_1129	0.70	-1.0
1,149,133	-		Synpcc7942_1129	0.70	-2.2
1,149,133	-		Synpcc7942_1129	0.70	-1.1
1,149,133	-		Synpcc7942_1129	0.70	-0.2
1,149,138	-		Synpcc7942_1129	0.70	-1.0
1,149,163	-		Synpcc7942_1129	0.73	-1.4
1,149,167	-		Synpcc7942_1129	0.74	-1.9
1,149,187	+		Synpcc7942_1129	0.76	+1.4
1,149,187	+		Synpcc7942_1129	0.76	-1.1
1,149,195	-		Synpcc7942_1129	0.77	-0.6
1,149,249	+		Synpcc7942_1129	0.84	-1.3
1,149,256	-		Synpcc7942_1129	0.84	-2.3
1,149,281	-		Synpcc7942_1129	0.87	+1.0
1,149,283	+		Synpcc7942_1129	0.88	-0.6
1,149,295	+		Synpcc7942_1129	0.89	+0.5
1,149,302	-		Synpcc7942_1129	0.90	+0.4
1,149,303	-		Synpcc7942_1129	0.90	-1.3
1,149,303	-		Synpcc7942_1129	0.90	-1.4
1,149,317	+				-0.1
1,149,317	+				+2.0
1,149,322	+				+0.4
1,149,351	+				-0.4
1,149,383	+				+1.0
1,149,383	+				+1.0
1,149,383	+				+0.6
1,149,383	+				-2.2
1,149,391	-				+1.9
1,149,393	+				-1.1
1,149,426	-				+0.4
1,149,439	-				-0.1
1,149,468	+				-1.8
1,149,468	+				-3.0
1,149,468	+				+0.7
1,149,468	+				+0.4
1,149,468	+				-2.4
1,149,468	+				-1.8
1,149,476	-				+0.0
1,149,478	+				+1.1
1,149,499	+				+1.0
1,149,519	+				-2.9
1,149,533	+				+1.0
1,149,612	-				-1.0
1,149,660	+		Synpcc7942_1130	0.12	-2.1
1,149,661	+		Synpcc7942_1130	0.12	-1.0
1,149,661	+		Synpcc7942_1130	0.12	-2.3
1,149,661	+		Synpcc7942_1130	0.12	-2.1
1,149,661	-		Synpcc7942_1130	0.12	-3.0
1,149,665	+		Synpcc7942_1130	0.12	-0.6
1,149,693	-		Synpcc7942_1130	0.14	+1.0
1,149,703	-		Synpcc7942_1130	0.14	+1.0
1,149,712	-		Synpcc7942_1130	0.15	-0.6
1,149,727	-		Synpcc7942_1130	0.16	-2.0
1,149,727	-		Synpcc7942_1130	0.16	-2.2
1,149,727	-		Synpcc7942_1130	0.16	-1.3
1,149,755	-		Synpcc7942_1130	0.17	+1.0
1,149,760	+		Synpcc7942_1130	0.17	-1.8
1,149,780	+		Synpcc7942_1130	0.18	-1.8
1,149,781	+		Synpcc7942_1130	0.19	-2.6
1,149,783	-		Synpcc7942_1130	0.19	+0.0
1,149,791	+		Synpcc7942_1130	0.19	+1.0
1,149,798	-		Synpcc7942_1130	0.19	+1.0
1,149,804	+		Synpcc7942_1130	0.20	-1.6
1,149,804	+		Synpcc7942_1130	0.20	-0.8
1,149,804	+		Synpcc7942_1130	0.20	-2.1
1,149,804	+		Synpcc7942_1130	0.20	+0.0
1,149,804	+		Synpcc7942_1130	0.20	-1.4
1,149,804	+		Synpcc7942_1130	0.20	-1.8
1,149,804	+		Synpcc7942_1130	0.20	+0.0
1,149,812	-		Synpcc7942_1130	0.20	-2.3
1,149,812	-		Synpcc7942_1130	0.20	+0.0
1,149,812	-		Synpcc7942_1130	0.20	+2.0
1,149,812	-		Synpcc7942_1130	0.20	-1.0
1,149,812	-		Synpcc7942_1130	0.20	-0.0
1,149,815	+		Synpcc7942_1130	0.20	-1.8
1,149,839	+		Synpcc7942_1130	0.22	-1.6
1,149,849	+		Synpcc7942_1130	0.22	+0.0
1,149,857	-		Synpcc7942_1130	0.23	-2.3
1,149,876	-		Synpcc7942_1130	0.24	-1.0
1,149,888	+		Synpcc7942_1130	0.24	-1.0
1,149,888	+		Synpcc7942_1130	0.24	+1.0
1,149,888	+		Synpcc7942_1130	0.24	+1.0
1,149,896	-		Synpcc7942_1130	0.25	+2.0
1,149,896	-		Synpcc7942_1130	0.25	-0.6
1,149,896	-		Synpcc7942_1130	0.25	-3.3
1,149,898	+		Synpcc7942_1130	0.25	-1.0
1,149,931	+		Synpcc7942_1130	0.27	-2.8
1,149,975	+		Synpcc7942_1130	0.29	-0.2
1,150,006	-		Synpcc7942_1130	0.31	-0.3
1,150,030	-		Synpcc7942_1130	0.32	-0.6
1,150,030	-		Synpcc7942_1130	0.32	+1.0
1,150,032	+		Synpcc7942_1130	0.32	-2.0
1,150,041	-		Synpcc7942_1130	0.33	-1.3
1,150,043	-		Synpcc7942_1130	0.33	-1.6
1,150,056	+		Synpcc7942_1130	0.34	-0.2
1,150,064	-		Synpcc7942_1130	0.34	-1.0
1,150,064	-		Synpcc7942_1130	0.34	+1.0
1,150,093	-		Synpcc7942_1130	0.36	-2.3
1,150,098	-		Synpcc7942_1130	0.36	-0.3
1,150,118	-		Synpcc7942_1130	0.37	-3.2
1,150,121	+		Synpcc7942_1130	0.37	-1.8
1,150,140	-		Synpcc7942_1130	0.38	+0.0
1,150,159	-		Synpcc7942_1130	0.39	+1.0
1,150,159	-		Synpcc7942_1130	0.39	-0.6
1,150,161	+		Synpcc7942_1130	0.39	+1.0
1,150,169	+		Synpcc7942_1130	0.40	-2.9
1,150,179	+		Synpcc7942_1130	0.40	-2.7
1,150,187	+		Synpcc7942_1130	0.41	+1.0
1,150,187	+		Synpcc7942_1130	0.41	-2.2
1,150,187	-		Synpcc7942_1130	0.41	+1.0
1,150,187	-		Synpcc7942_1130	0.41	-0.6
1,150,187	-		Synpcc7942_1130	0.41	+0.0
1,150,187	-		Synpcc7942_1130	0.41	-4.5
1,150,204	-		Synpcc7942_1130	0.42	-0.6
1,150,242	-		Synpcc7942_1130	0.44	-1.0
1,150,267	-		Synpcc7942_1130	0.45	+1.0
1,150,300	-		Synpcc7942_1130	0.47	-0.8
1,150,304	+		Synpcc7942_1130	0.47	-1.3
1,150,307	-		Synpcc7942_1130	0.47	-1.0
1,150,312	-		Synpcc7942_1130	0.48	-2.3
1,150,312	-		Synpcc7942_1130	0.48	+1.0
1,150,319	+		Synpcc7942_1130	0.48	-0.6
1,150,339	-		Synpcc7942_1130	0.49	-0.7
1,150,368	+		Synpcc7942_1130	0.51	-2.7