Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1009

Experiment: Biofilm Wash/Settlers in Fresh BG11R in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm Wash/Settlers in Fresh BG11R in Test Tubes with Spin rep 1
1,020,365	-				-1.8
1,020,422	+	purU	Synpcc7942_1008	0.11	-1.5
1,020,472	+	purU	Synpcc7942_1008	0.16	-0.1
1,020,521	+	purU	Synpcc7942_1008	0.22	-1.0
1,020,528	+	purU	Synpcc7942_1008	0.23	+0.6
1,020,571	-	purU	Synpcc7942_1008	0.28	+0.0
1,020,917	-	purU	Synpcc7942_1008	0.68	-1.6
1,020,955	+	purU	Synpcc7942_1008	0.73	-0.5
1,020,957	+	purU	Synpcc7942_1008	0.73	-1.5
1,021,033	-	purU	Synpcc7942_1008	0.82	+0.0
1,021,033	-	purU	Synpcc7942_1008	0.82	+2.0
1,021,054	-	purU	Synpcc7942_1008	0.84	-1.0
1,021,083	+	purU	Synpcc7942_1008	0.88	-0.2
1,021,152	-				-1.6
1,021,157	+				+0.0
1,021,227	+				+2.0
1,021,268	-				-0.3
1,021,313	+				-0.4
1,021,314	-				-1.3
1,021,350	-				-0.6
1,021,351	+				-1.5
1,021,353	+				+1.0
1,021,361	+				-0.5
1,021,362	+				-3.5
1,021,369	-				-1.3
1,021,369	-				-1.7
1,021,423	-		Synpcc7942_1009	0.12	-2.2
1,021,973	-				+0.0
1,022,070	+		Synpcc7942_1010	0.14	+1.0
1,022,083	+		Synpcc7942_1010	0.16	-1.8
1,022,171	-		Synpcc7942_1010	0.28	-1.3
1,022,172	-		Synpcc7942_1010	0.28	-2.1
1,022,196	-		Synpcc7942_1010	0.31	+0.5
1,022,206	-		Synpcc7942_1010	0.32	+1.0
1,022,208	+		Synpcc7942_1010	0.33	-0.3
1,022,219	-		Synpcc7942_1010	0.34	+1.0
1,022,220	+		Synpcc7942_1010	0.34	+1.0
1,022,340	-		Synpcc7942_1010	0.51	-0.8
1,022,353	+		Synpcc7942_1010	0.52	-1.0
1,022,353	+		Synpcc7942_1010	0.52	+0.0
1,022,359	+		Synpcc7942_1010	0.53	+1.8
1,022,359	+		Synpcc7942_1010	0.53	+0.0
1,022,361	-		Synpcc7942_1010	0.54	-1.5
1,022,361	-		Synpcc7942_1010	0.54	+0.5
1,022,363	-		Synpcc7942_1010	0.54	+2.0
1,022,376	-		Synpcc7942_1010	0.56	-1.0
1,022,378	+		Synpcc7942_1010	0.56	+1.0
1,022,378	+		Synpcc7942_1010	0.56	+1.4
1,022,386	-		Synpcc7942_1010	0.57	+1.0
1,022,386	-		Synpcc7942_1010	0.57	+1.5
1,022,401	-		Synpcc7942_1010	0.59	+2.5
1,022,467	+		Synpcc7942_1010	0.68	-1.3
1,022,475	-		Synpcc7942_1010	0.69	+0.0
1,022,480	-		Synpcc7942_1010	0.70	-0.9
1,022,486	+		Synpcc7942_1010	0.71	-0.2
1,022,486	+		Synpcc7942_1010	0.71	-1.3
1,022,486	+		Synpcc7942_1010	0.71	-0.5
1,022,494	-		Synpcc7942_1010	0.72	+1.0
1,022,663	+				-3.0
1,022,685	+				+0.1
1,022,704	-				+1.0
1,022,706	+				-0.0
1,022,706	+				-1.7
1,022,714	-				-0.2
1,022,714	-				-1.9
1,022,716	-				-1.8
1,022,729	+				-0.1
1,022,729	+				+1.6
1,022,729	+				+0.3
1,022,737	-				-0.4
1,022,754	+				-0.5
1,022,754	+				+1.0
1,022,755	-				+0.0
1,022,755	-				-2.5
1,022,760	-				+4.3
1,022,777	+				+2.0
1,022,777	+				-0.5
1,022,785	-				+3.0
1,022,873	-				-0.1
1,022,892	+	sphS	Synpcc7942_1011	0.14	+0.0
1,022,892	+	sphS	Synpcc7942_1011	0.14	-1.1
1,022,919	-	sphS	Synpcc7942_1011	0.16	-1.0
1,022,920	+	sphS	Synpcc7942_1011	0.17	+2.0
1,022,943	-	sphS	Synpcc7942_1011	0.18	+0.0
1,022,943	-	sphS	Synpcc7942_1011	0.18	-1.4