Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06036 and H281DRAFT_06037 are separated by 97 nucleotides H281DRAFT_06037 and H281DRAFT_06038 are separated by 51 nucleotides H281DRAFT_06038 and H281DRAFT_06039 are separated by 1 nucleotides H281DRAFT_06039 and H281DRAFT_06040 are separated by 41 nucleotides
H281DRAFT_06036: H281DRAFT_06036 - Membrane-associated phospholipid phosphatase, at 40,888 to 41,622
_06036
H281DRAFT_06037: H281DRAFT_06037 - molybdate transport system substrate-binding protein, at 41,720 to 42,526
_06037
H281DRAFT_06038: H281DRAFT_06038 - molybdate transport system permease protein, at 42,578 to 43,252
_06038
H281DRAFT_06039: H281DRAFT_06039 - molybdate transport system ATP-binding protein, at 43,254 to 43,955
_06039
H281DRAFT_06040: H281DRAFT_06040 - molybdate transport system regulatory protein, at 43,997 to 44,833
_06040
Position (kb) 42
43
44 Strain fitness (log2 ratio) -2
-1
0
1 at 41.695 kb on + strand at 41.697 kb on + strand at 41.701 kb on - strand at 41.956 kb on - strand, within H281DRAFT_06037 at 42.170 kb on + strand, within H281DRAFT_06037 at 42.293 kb on + strand, within H281DRAFT_06037 at 42.542 kb on - strand at 42.542 kb on - strand at 43.253 kb on + strand at 43.254 kb on - strand at 43.435 kb on + strand, within H281DRAFT_06039 at 43.436 kb on - strand, within H281DRAFT_06039 at 43.436 kb on - strand, within H281DRAFT_06039 at 43.642 kb on + strand, within H281DRAFT_06039 at 43.827 kb on - strand, within H281DRAFT_06039 at 44.016 kb on - strand at 44.016 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 41,695 + -0.5 41,697 + +0.1 41,701 - +0.3 41,956 - H281DRAFT_06037 0.29 -1.1 42,170 + H281DRAFT_06037 0.56 -0.4 42,293 + H281DRAFT_06037 0.71 -2.4 42,542 - -0.5 42,542 - +0.2 43,253 + +1.3 43,254 - +0.6 43,435 + H281DRAFT_06039 0.26 -0.7 43,436 - H281DRAFT_06039 0.26 -0.7 43,436 - H281DRAFT_06039 0.26 -2.4 43,642 + H281DRAFT_06039 0.55 -2.7 43,827 - H281DRAFT_06039 0.82 -2.5 44,016 - -0.2 44,016 - -0.2
Or see this region's nucleotide sequence