Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05734 and H281DRAFT_05735 are separated by 294 nucleotides H281DRAFT_05735 and H281DRAFT_05736 are separated by 313 nucleotides H281DRAFT_05736 and H281DRAFT_05737 are separated by 702 nucleotides
H281DRAFT_05734: H281DRAFT_05734 - aquaporin Z, at 6,774 to 7,514
_05734
H281DRAFT_05735: H281DRAFT_05735 - DNA-binding protein H-NS, at 7,809 to 8,111
_05735
H281DRAFT_05736: H281DRAFT_05736 - Glycosyltransferase involved in cell wall bisynthesis, at 8,425 to 9,489
_05736
H281DRAFT_05737: H281DRAFT_05737 - flagellar transcriptional activator FlhD, at 10,192 to 10,512
_05737
Position (kb)
8
9
10 Strain fitness (log2 ratio)
-1
0
1
2 at 7.703 kb on + strand at 7.725 kb on + strand at 7.763 kb on - strand at 7.791 kb on + strand at 8.007 kb on - strand, within H281DRAFT_05735 at 8.010 kb on + strand, within H281DRAFT_05735 at 8.030 kb on + strand, within H281DRAFT_05735 at 8.030 kb on + strand, within H281DRAFT_05735 at 8.033 kb on + strand, within H281DRAFT_05735 at 8.034 kb on - strand, within H281DRAFT_05735 at 8.034 kb on - strand, within H281DRAFT_05735 at 8.165 kb on - strand at 8.365 kb on - strand at 8.365 kb on - strand at 8.484 kb on - strand at 8.495 kb on + strand at 8.495 kb on + strand at 8.496 kb on - strand at 8.608 kb on + strand, within H281DRAFT_05736 at 8.608 kb on + strand, within H281DRAFT_05736 at 8.609 kb on - strand at 8.613 kb on + strand, within H281DRAFT_05736 at 8.613 kb on + strand, within H281DRAFT_05736 at 8.614 kb on - strand, within H281DRAFT_05736 at 8.615 kb on + strand, within H281DRAFT_05736 at 8.616 kb on - strand, within H281DRAFT_05736 at 8.616 kb on - strand, within H281DRAFT_05736 at 8.849 kb on + strand, within H281DRAFT_05736 at 8.849 kb on + strand, within H281DRAFT_05736 at 8.849 kb on + strand, within H281DRAFT_05736 at 8.849 kb on + strand, within H281DRAFT_05736 at 8.850 kb on - strand, within H281DRAFT_05736 at 8.850 kb on - strand, within H281DRAFT_05736 at 8.970 kb on - strand, within H281DRAFT_05736 at 9.023 kb on + strand, within H281DRAFT_05736 at 9.023 kb on + strand, within H281DRAFT_05736 at 9.023 kb on + strand, within H281DRAFT_05736 at 9.023 kb on + strand, within H281DRAFT_05736 at 9.023 kb on + strand, within H281DRAFT_05736 at 9.024 kb on - strand, within H281DRAFT_05736 at 9.200 kb on + strand, within H281DRAFT_05736 at 9.200 kb on + strand, within H281DRAFT_05736 at 9.201 kb on - strand, within H281DRAFT_05736 at 9.201 kb on - strand, within H281DRAFT_05736 at 9.201 kb on - strand, within H281DRAFT_05736 at 9.201 kb on - strand, within H281DRAFT_05736 at 9.201 kb on - strand, within H281DRAFT_05736 at 9.247 kb on + strand, within H281DRAFT_05736 at 9.247 kb on + strand, within H281DRAFT_05736 at 9.247 kb on + strand, within H281DRAFT_05736 at 9.248 kb on - strand, within H281DRAFT_05736 at 9.410 kb on + strand at 9.410 kb on + strand at 9.411 kb on - strand at 9.461 kb on + strand at 9.462 kb on - strand at 9.508 kb on - strand at 9.680 kb on - strand at 9.701 kb on + strand at 9.702 kb on - strand at 9.785 kb on + strand at 9.787 kb on + strand at 9.787 kb on + strand at 9.787 kb on + strand at 9.788 kb on - strand at 9.823 kb on + strand at 9.824 kb on - strand at 9.824 kb on - strand at 9.824 kb on - strand at 9.847 kb on + strand at 9.849 kb on + strand at 9.849 kb on + strand at 9.924 kb on - strand at 9.939 kb on + strand at 9.964 kb on + strand at 10.012 kb on + strand at 10.012 kb on + strand at 10.028 kb on + strand at 10.028 kb on + strand at 10.028 kb on + strand at 10.029 kb on - strand at 10.029 kb on - strand at 10.175 kb on + strand at 10.175 kb on + strand at 10.176 kb on - strand at 10.243 kb on + strand, within H281DRAFT_05737 at 10.243 kb on + strand, within H281DRAFT_05737 at 10.244 kb on - strand, within H281DRAFT_05737 at 10.244 kb on - strand, within H281DRAFT_05737
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 7,703 + +0.3 7,725 + +0.3 7,763 - +0.2 7,791 + -0.1 8,007 - H281DRAFT_05735 0.65 -0.5 8,010 + H281DRAFT_05735 0.66 -0.6 8,030 + H281DRAFT_05735 0.73 -0.7 8,030 + H281DRAFT_05735 0.73 -0.7 8,033 + H281DRAFT_05735 0.74 -0.8 8,034 - H281DRAFT_05735 0.74 -0.4 8,034 - H281DRAFT_05735 0.74 -0.0 8,165 - +0.1 8,365 - +0.5 8,365 - -0.1 8,484 - -0.0 8,495 + -0.1 8,495 + +0.5 8,496 - +0.4 8,608 + H281DRAFT_05736 0.17 -0.1 8,608 + H281DRAFT_05736 0.17 +0.7 8,609 - +0.1 8,613 + H281DRAFT_05736 0.18 +0.5 8,613 + H281DRAFT_05736 0.18 -0.2 8,614 - H281DRAFT_05736 0.18 +1.0 8,615 + H281DRAFT_05736 0.18 -0.2 8,616 - H281DRAFT_05736 0.18 +0.4 8,616 - H281DRAFT_05736 0.18 -1.3 8,849 + H281DRAFT_05736 0.40 +0.2 8,849 + H281DRAFT_05736 0.40 -0.3 8,849 + H281DRAFT_05736 0.40 +1.1 8,849 + H281DRAFT_05736 0.40 +1.7 8,850 - H281DRAFT_05736 0.40 +0.4 8,850 - H281DRAFT_05736 0.40 -0.3 8,970 - H281DRAFT_05736 0.51 +0.2 9,023 + H281DRAFT_05736 0.56 +0.6 9,023 + H281DRAFT_05736 0.56 +2.3 9,023 + H281DRAFT_05736 0.56 +0.3 9,023 + H281DRAFT_05736 0.56 +1.6 9,023 + H281DRAFT_05736 0.56 +0.3 9,024 - H281DRAFT_05736 0.56 +0.1 9,200 + H281DRAFT_05736 0.73 +0.2 9,200 + H281DRAFT_05736 0.73 -0.3 9,201 - H281DRAFT_05736 0.73 -0.5 9,201 - H281DRAFT_05736 0.73 +0.6 9,201 - H281DRAFT_05736 0.73 +0.6 9,201 - H281DRAFT_05736 0.73 -0.1 9,201 - H281DRAFT_05736 0.73 -0.2 9,247 + H281DRAFT_05736 0.77 +1.3 9,247 + H281DRAFT_05736 0.77 -0.3 9,247 + H281DRAFT_05736 0.77 -1.0 9,248 - H281DRAFT_05736 0.77 -0.6 9,410 + +0.8 9,410 + +0.1 9,411 - +0.2 9,461 + +0.1 9,462 - -0.9 9,508 - -0.4 9,680 - +0.1 9,701 + +0.4 9,702 - -0.7 9,785 + -0.9 9,787 + -1.4 9,787 + -1.2 9,787 + +0.7 9,788 - -0.9 9,823 + +0.4 9,824 - -0.1 9,824 - -0.4 9,824 - +1.1 9,847 + -0.8 9,849 + -0.3 9,849 + +0.4 9,924 - -0.1 9,939 + -0.2 9,964 + +0.7 10,012 + -0.0 10,012 + +0.1 10,028 + +0.1 10,028 + -0.0 10,028 + +0.5 10,029 - -0.2 10,029 - -0.3 10,175 + +0.9 10,175 + +0.5 10,176 - +0.6 10,243 + H281DRAFT_05737 0.16 -0.3 10,243 + H281DRAFT_05737 0.16 +0.3 10,244 - H281DRAFT_05737 0.16 -0.6 10,244 - H281DRAFT_05737 0.16 +0.1
Or see this region's nucleotide sequence