Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05348 and H281DRAFT_05349 are separated by 220 nucleotides H281DRAFT_05349 and H281DRAFT_05350 overlap by 31 nucleotides H281DRAFT_05350 and H281DRAFT_05351 are separated by 27 nucleotides
H281DRAFT_05348: H281DRAFT_05348 - Hypoxanthine phosphoribosyltransferase, at 100,310 to 101,263
_05348
H281DRAFT_05349: H281DRAFT_05349 - hypothetical protein, at 101,484 to 102,026
_05349
H281DRAFT_05350: H281DRAFT_05350 - Signal transduction histidine kinase, at 101,996 to 103,846
_05350
H281DRAFT_05351: H281DRAFT_05351 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 103,874 to 104,728
_05351
Position (kb) 101
102
103
104 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 101.379 kb on - strand at 101.379 kb on - strand at 101.379 kb on - strand at 101.473 kb on + strand at 101.473 kb on + strand at 101.494 kb on + strand at 101.665 kb on - strand, within H281DRAFT_05349 at 101.768 kb on + strand, within H281DRAFT_05349 at 101.827 kb on - strand, within H281DRAFT_05349 at 101.832 kb on + strand, within H281DRAFT_05349 at 101.832 kb on + strand, within H281DRAFT_05349 at 102.052 kb on - strand at 102.162 kb on - strand at 102.173 kb on + strand at 102.174 kb on - strand at 103.118 kb on + strand, within H281DRAFT_05350 at 103.180 kb on - strand, within H281DRAFT_05350 at 103.367 kb on - strand, within H281DRAFT_05350 at 103.367 kb on - strand, within H281DRAFT_05350 at 103.519 kb on + strand, within H281DRAFT_05350 at 103.776 kb on + strand at 103.791 kb on - strand at 103.954 kb on - strand at 104.301 kb on + strand, within H281DRAFT_05351 at 104.313 kb on + strand, within H281DRAFT_05351 at 104.526 kb on + strand, within H281DRAFT_05351 at 104.728 kb on + strand at 104.728 kb on + strand at 104.728 kb on + strand at 104.729 kb on - strand at 104.729 kb on - strand at 104.782 kb on - strand at 104.819 kb on - strand at 104.840 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 101,379 - -0.1 101,379 - +0.1 101,379 - +0.3 101,473 + -1.0 101,473 + +1.8 101,494 + -0.3 101,665 - H281DRAFT_05349 0.33 -0.4 101,768 + H281DRAFT_05349 0.52 -0.2 101,827 - H281DRAFT_05349 0.63 -0.4 101,832 + H281DRAFT_05349 0.64 -0.0 101,832 + H281DRAFT_05349 0.64 +0.2 102,052 - -0.4 102,162 - +0.8 102,173 + -1.4 102,174 - -1.2 103,118 + H281DRAFT_05350 0.61 -0.8 103,180 - H281DRAFT_05350 0.64 -2.2 103,367 - H281DRAFT_05350 0.74 -3.0 103,367 - H281DRAFT_05350 0.74 +0.4 103,519 + H281DRAFT_05350 0.82 -0.2 103,776 + +0.9 103,791 - +0.0 103,954 - -0.6 104,301 + H281DRAFT_05351 0.50 -1.5 104,313 + H281DRAFT_05351 0.51 -0.4 104,526 + H281DRAFT_05351 0.76 -2.7 104,728 + +0.8 104,728 + -1.2 104,728 + -1.7 104,729 - +0.3 104,729 - +1.3 104,782 - -0.3 104,819 - +0.3 104,840 - +0.9
Or see this region's nucleotide sequence