Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05151 and H281DRAFT_05152 are separated by 117 nucleotides H281DRAFT_05152 and H281DRAFT_05153 are separated by 83 nucleotides H281DRAFT_05153 and H281DRAFT_05154 are separated by 49 nucleotides
H281DRAFT_05151: H281DRAFT_05151 - hypothetical protein, at 105,507 to 105,671
_05151
H281DRAFT_05152: H281DRAFT_05152 - protein of unknown function (DUF1992), at 105,789 to 106,220
_05152
H281DRAFT_05153: H281DRAFT_05153 - tRNA(adenine34) deaminase, at 106,304 to 106,987
_05153
H281DRAFT_05154: H281DRAFT_05154 - murein tetrapeptidase LD-carboxypeptidase (EC:3.4.17.13). Serine peptidase. MEROPS family S66, at 107,037 to 107,963
_05154
Position (kb)
106
107 Strain fitness (log2 ratio)
-1
0
1
2 at 105.330 kb on - strand at 105.374 kb on + strand at 105.375 kb on - strand at 105.391 kb on + strand at 105.392 kb on - strand at 105.484 kb on + strand at 105.485 kb on - strand at 105.485 kb on - strand at 105.577 kb on + strand, within H281DRAFT_05151 at 105.590 kb on + strand, within H281DRAFT_05151 at 105.755 kb on + strand at 105.756 kb on - strand at 105.776 kb on + strand at 105.821 kb on + strand at 106.315 kb on + strand at 107.032 kb on + strand at 107.152 kb on + strand, within H281DRAFT_05154 at 107.153 kb on - strand, within H281DRAFT_05154 at 107.153 kb on - strand, within H281DRAFT_05154 at 107.615 kb on + strand, within H281DRAFT_05154 at 107.616 kb on - strand, within H281DRAFT_05154 at 107.692 kb on - strand, within H281DRAFT_05154 at 107.877 kb on - strand at 107.877 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 105,330 - -0.4 105,374 + +0.0 105,375 - +0.7 105,391 + +0.2 105,392 - +0.1 105,484 + +0.5 105,485 - +0.3 105,485 - +0.2 105,577 + H281DRAFT_05151 0.42 +0.3 105,590 + H281DRAFT_05151 0.50 +0.3 105,755 + -0.0 105,756 - +0.4 105,776 + +0.0 105,821 + +0.4 106,315 + -0.2 107,032 + -0.9 107,152 + H281DRAFT_05154 0.12 +2.0 107,153 - H281DRAFT_05154 0.13 +0.5 107,153 - H281DRAFT_05154 0.13 +0.1 107,615 + H281DRAFT_05154 0.62 -0.2 107,616 - H281DRAFT_05154 0.62 +0.0 107,692 - H281DRAFT_05154 0.71 +0.5 107,877 - +0.2 107,877 - +0.2
Or see this region's nucleotide sequence