Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03489 and H281DRAFT_03490 are separated by 18 nucleotides H281DRAFT_03490 and H281DRAFT_03491 are separated by 2 nucleotides H281DRAFT_03491 and H281DRAFT_03492 are separated by 56 nucleotides
H281DRAFT_03489: H281DRAFT_03489 - Acyl-CoA dehydrogenase, at 573,380 to 574,567
_03489
H281DRAFT_03490: H281DRAFT_03490 - fatty-acyl-CoA synthase, at 574,586 to 576,184
_03490
H281DRAFT_03491: H281DRAFT_03491 - short chain enoyl-CoA hydratase (EC 4.2.1.17)/Enoyl-CoA hydratase (EC 4.2.1.17), at 576,187 to 576,987
_03491
H281DRAFT_03492: H281DRAFT_03492 - transcriptional regulator, AraC family with amidase-like domain, at 577,044 to 578,180
_03492
Position (kb) 574
575
576
577 Strain fitness (log2 ratio) -1
0
1 at 573.659 kb on - strand, within H281DRAFT_03489 at 573.829 kb on + strand, within H281DRAFT_03489 at 573.894 kb on - strand, within H281DRAFT_03489 at 573.894 kb on - strand, within H281DRAFT_03489 at 573.894 kb on - strand, within H281DRAFT_03489 at 573.894 kb on - strand, within H281DRAFT_03489 at 573.976 kb on + strand, within H281DRAFT_03489 at 573.977 kb on - strand, within H281DRAFT_03489 at 574.162 kb on + strand, within H281DRAFT_03489 at 574.292 kb on - strand, within H281DRAFT_03489 at 574.313 kb on + strand, within H281DRAFT_03489 at 574.445 kb on + strand, within H281DRAFT_03489 at 574.791 kb on - strand, within H281DRAFT_03490 at 574.961 kb on + strand, within H281DRAFT_03490 at 575.025 kb on - strand, within H281DRAFT_03490 at 575.250 kb on - strand, within H281DRAFT_03490 at 575.912 kb on + strand, within H281DRAFT_03490 at 576.448 kb on + strand, within H281DRAFT_03491
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 573,659 - H281DRAFT_03489 0.23 +0.5 573,829 + H281DRAFT_03489 0.38 +0.5 573,894 - H281DRAFT_03489 0.43 +0.1 573,894 - H281DRAFT_03489 0.43 +0.9 573,894 - H281DRAFT_03489 0.43 +0.1 573,894 - H281DRAFT_03489 0.43 +0.7 573,976 + H281DRAFT_03489 0.50 +0.5 573,977 - H281DRAFT_03489 0.50 -0.6 574,162 + H281DRAFT_03489 0.66 +0.4 574,292 - H281DRAFT_03489 0.77 +0.6 574,313 + H281DRAFT_03489 0.79 -0.3 574,445 + H281DRAFT_03489 0.90 -1.3 574,791 - H281DRAFT_03490 0.13 -0.4 574,961 + H281DRAFT_03490 0.23 +0.0 575,025 - H281DRAFT_03490 0.27 +0.2 575,250 - H281DRAFT_03490 0.42 -0.1 575,912 + H281DRAFT_03490 0.83 +0.2 576,448 + H281DRAFT_03491 0.33 -0.5
Or see this region's nucleotide sequence