Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03337

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03336 and H281DRAFT_03337 are separated by 40 nucleotidesH281DRAFT_03337 and H281DRAFT_03338 are separated by 54 nucleotides H281DRAFT_03336: H281DRAFT_03336 - Na+/H+-dicarboxylate symporter, at 393,244 to 394,560 _03336 H281DRAFT_03337: H281DRAFT_03337 - molybdate transport system substrate-binding protein, at 394,601 to 395,383 _03337 H281DRAFT_03338: H281DRAFT_03338 - MFS transporter, MHS family, citrate/tricarballylate:H+ symporter, at 395,438 to 396,736 _03338 Position (kb) 394 395 396Strain fitness (log2 ratio) -1 0 1at 393.605 kb on - strand, within H281DRAFT_03336at 393.925 kb on + strand, within H281DRAFT_03336at 393.926 kb on - strand, within H281DRAFT_03336at 394.009 kb on + strand, within H281DRAFT_03336at 394.010 kb on - strand, within H281DRAFT_03336at 394.668 kb on + strandat 394.933 kb on - strand, within H281DRAFT_03337at 395.390 kb on - strandat 395.617 kb on - strand, within H281DRAFT_03338at 395.700 kb on + strand, within H281DRAFT_03338at 395.896 kb on + strand, within H281DRAFT_03338at 395.897 kb on - strand, within H281DRAFT_03338at 396.017 kb on + strand, within H281DRAFT_03338

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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393,605 - H281DRAFT_03336 0.27 +0.3
393,925 + H281DRAFT_03336 0.52 -0.5
393,926 - H281DRAFT_03336 0.52 -1.1
394,009 + H281DRAFT_03336 0.58 -1.3
394,010 - H281DRAFT_03336 0.58 -0.7
394,668 + +0.7
394,933 - H281DRAFT_03337 0.42 -0.9
395,390 - +0.3
395,617 - H281DRAFT_03338 0.14 +0.3
395,700 + H281DRAFT_03338 0.20 -0.2
395,896 + H281DRAFT_03338 0.35 -0.2
395,897 - H281DRAFT_03338 0.35 -0.3
396,017 + H281DRAFT_03338 0.45 +0.4

Or see this region's nucleotide sequence