Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02950 and H281DRAFT_02951 are separated by 16 nucleotides H281DRAFT_02951 and H281DRAFT_02952 are separated by 56 nucleotides H281DRAFT_02952 and H281DRAFT_02953 overlap by 14 nucleotides
H281DRAFT_02950: H281DRAFT_02950 - DNA-binding transcriptional regulator, LysR family, at 564,276 to 565,265
_02950
H281DRAFT_02951: H281DRAFT_02951 - 5-deoxyglucuronate isomerase, at 565,282 to 566,112
_02951
H281DRAFT_02952: H281DRAFT_02952 - fructuronate reductase, at 566,169 to 567,662
_02952
H281DRAFT_02953: H281DRAFT_02953 - D-mannonate dehydratase (EC 4.2.1.8), at 567,649 to 568,710
_02953
Position (kb) 566
567
568 Strain fitness (log2 ratio) -2
-1
0
1 at 565.324 kb on + strand at 565.395 kb on - strand at 565.548 kb on - strand, within H281DRAFT_02951 at 565.550 kb on + strand, within H281DRAFT_02951 at 565.551 kb on - strand, within H281DRAFT_02951 at 565.565 kb on + strand, within H281DRAFT_02951 at 565.566 kb on - strand, within H281DRAFT_02951 at 565.851 kb on - strand at 565.955 kb on - strand, within H281DRAFT_02951 at 566.028 kb on - strand, within H281DRAFT_02951 at 566.402 kb on - strand, within H281DRAFT_02952 at 566.741 kb on - strand, within H281DRAFT_02952 at 567.315 kb on + strand, within H281DRAFT_02952 at 567.315 kb on + strand, within H281DRAFT_02952 at 567.316 kb on - strand, within H281DRAFT_02952 at 567.593 kb on - strand at 567.821 kb on + strand, within H281DRAFT_02953 at 567.973 kb on - strand, within H281DRAFT_02953 at 568.178 kb on + strand, within H281DRAFT_02953 at 568.277 kb on - strand, within H281DRAFT_02953 at 568.403 kb on + strand, within H281DRAFT_02953 at 568.404 kb on - strand, within H281DRAFT_02953 at 568.614 kb on - strand at 568.658 kb on + strand at 568.659 kb on - strand at 568.659 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 565,324 + -0.3 565,395 - +0.2 565,548 - H281DRAFT_02951 0.32 +0.1 565,550 + H281DRAFT_02951 0.32 +0.4 565,551 - H281DRAFT_02951 0.32 -0.8 565,565 + H281DRAFT_02951 0.34 +0.4 565,566 - H281DRAFT_02951 0.34 -0.1 565,851 - -0.4 565,955 - H281DRAFT_02951 0.81 -2.4 566,028 - H281DRAFT_02951 0.90 -0.5 566,402 - H281DRAFT_02952 0.16 +0.3 566,741 - H281DRAFT_02952 0.38 -0.8 567,315 + H281DRAFT_02952 0.77 -1.6 567,315 + H281DRAFT_02952 0.77 +0.3 567,316 - H281DRAFT_02952 0.77 +0.5 567,593 - -1.1 567,821 + H281DRAFT_02953 0.16 +0.3 567,973 - H281DRAFT_02953 0.31 +0.3 568,178 + H281DRAFT_02953 0.50 +0.2 568,277 - H281DRAFT_02953 0.59 +0.8 568,403 + H281DRAFT_02953 0.71 -0.9 568,404 - H281DRAFT_02953 0.71 -0.6 568,614 - +0.3 568,658 + -2.7 568,659 - +0.3 568,659 - -0.0
Or see this region's nucleotide sequence