Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_02745

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_02743 and H281DRAFT_02744 are separated by 442 nucleotidesH281DRAFT_02744 and H281DRAFT_02745 are separated by 163 nucleotidesH281DRAFT_02745 and H281DRAFT_02746 are separated by 51 nucleotides H281DRAFT_02743: H281DRAFT_02743 - protein of unknown function (DUF4148), at 328,747 to 329,055 _02743 H281DRAFT_02744: H281DRAFT_02744 - Protein of unknown function (DUF3563), at 329,498 to 329,635 _02744 H281DRAFT_02745: H281DRAFT_02745 - Pimeloyl-ACP methyl ester carboxylesterase, at 329,799 to 330,608 _02745 H281DRAFT_02746: H281DRAFT_02746 - Nicotinamidase-related amidase, at 330,660 to 331,340 _02746 Position (kb) 329 330 331Strain fitness (log2 ratio) -1 0 1at 328.839 kb on - strand, within H281DRAFT_02743at 330.129 kb on + strand, within H281DRAFT_02745at 330.868 kb on - strand, within H281DRAFT_02746at 330.935 kb on + strand, within H281DRAFT_02746at 330.936 kb on - strand, within H281DRAFT_02746at 330.936 kb on - strand, within H281DRAFT_02746at 331.134 kb on - strand, within H281DRAFT_02746at 331.505 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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328,839 - H281DRAFT_02743 0.30 -0.4
330,129 + H281DRAFT_02745 0.41 +0.6
330,868 - H281DRAFT_02746 0.31 -0.3
330,935 + H281DRAFT_02746 0.40 -0.2
330,936 - H281DRAFT_02746 0.41 -0.5
330,936 - H281DRAFT_02746 0.41 +1.5
331,134 - H281DRAFT_02746 0.70 +0.2
331,505 + -1.2

Or see this region's nucleotide sequence