Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02722 and H281DRAFT_02723 are separated by 219 nucleotides H281DRAFT_02723 and H281DRAFT_02724 are separated by 82 nucleotides H281DRAFT_02724 and H281DRAFT_02725 are separated by 73 nucleotides
H281DRAFT_02722: H281DRAFT_02722 - gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03, at 306,499 to 308,283
_02722
H281DRAFT_02723: H281DRAFT_02723 - transcriptional regulator, GntR family, at 308,503 to 309,180
_02723
H281DRAFT_02724: H281DRAFT_02724 - Beta-lactamase class C and other penicillin binding proteins, at 309,263 to 310,315
_02724
H281DRAFT_02725: H281DRAFT_02725 - MFS transporter, MHS family, proline/betaine transporter, at 310,389 to 311,678
_02725
Position (kb) 309
310
311 Strain fitness (log2 ratio) -1
0
1 at 308.409 kb on + strand at 308.624 kb on + strand, within H281DRAFT_02723 at 308.625 kb on - strand, within H281DRAFT_02723 at 308.690 kb on - strand, within H281DRAFT_02723 at 308.778 kb on - strand, within H281DRAFT_02723 at 308.918 kb on + strand, within H281DRAFT_02723 at 309.153 kb on - strand at 309.403 kb on - strand, within H281DRAFT_02724 at 309.466 kb on - strand, within H281DRAFT_02724 at 309.497 kb on - strand, within H281DRAFT_02724 at 309.811 kb on - strand, within H281DRAFT_02724 at 309.885 kb on + strand, within H281DRAFT_02724 at 309.886 kb on - strand, within H281DRAFT_02724 at 310.077 kb on + strand, within H281DRAFT_02724 at 310.077 kb on + strand, within H281DRAFT_02724 at 310.482 kb on - strand at 310.482 kb on - strand at 310.552 kb on + strand, within H281DRAFT_02725 at 310.553 kb on - strand, within H281DRAFT_02725 at 310.627 kb on + strand, within H281DRAFT_02725 at 310.759 kb on - strand, within H281DRAFT_02725 at 310.880 kb on - strand, within H281DRAFT_02725 at 310.890 kb on - strand, within H281DRAFT_02725 at 310.891 kb on + strand, within H281DRAFT_02725 at 310.891 kb on + strand, within H281DRAFT_02725 at 310.892 kb on - strand, within H281DRAFT_02725 at 310.892 kb on - strand, within H281DRAFT_02725 at 310.903 kb on + strand, within H281DRAFT_02725 at 310.904 kb on - strand, within H281DRAFT_02725
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 308,409 + +0.2 308,624 + H281DRAFT_02723 0.18 +0.1 308,625 - H281DRAFT_02723 0.18 +0.8 308,690 - H281DRAFT_02723 0.28 +0.4 308,778 - H281DRAFT_02723 0.41 +0.0 308,918 + H281DRAFT_02723 0.61 +0.2 309,153 - -0.3 309,403 - H281DRAFT_02724 0.13 -0.2 309,466 - H281DRAFT_02724 0.19 +1.2 309,497 - H281DRAFT_02724 0.22 +1.7 309,811 - H281DRAFT_02724 0.52 +0.6 309,885 + H281DRAFT_02724 0.59 +0.4 309,886 - H281DRAFT_02724 0.59 -0.2 310,077 + H281DRAFT_02724 0.77 +0.0 310,077 + H281DRAFT_02724 0.77 -0.4 310,482 - -0.2 310,482 - -0.1 310,552 + H281DRAFT_02725 0.13 +0.2 310,553 - H281DRAFT_02725 0.13 -0.5 310,627 + H281DRAFT_02725 0.18 +0.5 310,759 - H281DRAFT_02725 0.29 +0.3 310,880 - H281DRAFT_02725 0.38 -0.3 310,890 - H281DRAFT_02725 0.39 -0.5 310,891 + H281DRAFT_02725 0.39 +0.2 310,891 + H281DRAFT_02725 0.39 +0.7 310,892 - H281DRAFT_02725 0.39 +0.0 310,892 - H281DRAFT_02725 0.39 +0.3 310,903 + H281DRAFT_02725 0.40 -0.3 310,904 - H281DRAFT_02725 0.40 +0.3
Or see this region's nucleotide sequence