Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3651

Experiment: Carbon source Sucrose 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 10 mM
48,186	-		Dshi_3648	0.60	+0.5
48,194	+		Dshi_3648	0.61	-0.4
48,202	+		Dshi_3648	0.62	+1.2
48,202	-		Dshi_3648	0.62	-0.2
48,210	-		Dshi_3648	0.63	+0.5
48,267	-		Dshi_3648	0.69	-0.3
48,317	+		Dshi_3648	0.74	+0.3
48,318	+		Dshi_3648	0.74	-0.5
48,351	-		Dshi_3648	0.77	-1.2
48,367	-		Dshi_3648	0.79	+1.8
48,385	+		Dshi_3648	0.81	-0.1
48,387	+		Dshi_3648	0.81	-0.2
48,407	-		Dshi_3648	0.83	-0.3
48,456	-		Dshi_3648	0.88	-0.6
48,555	-				-1.3
48,605	+		Dshi_3649	0.17	+0.2
48,638	-		Dshi_3649	0.34	-3.0
48,643	-		Dshi_3649	0.36	+0.8
48,652	-		Dshi_3649	0.41	-0.3
48,669	+		Dshi_3649	0.50	-0.6
48,669	+		Dshi_3649	0.50	-0.8
48,669	+		Dshi_3649	0.50	+0.8
48,669	+		Dshi_3649	0.50	+1.7
48,669	+		Dshi_3649	0.50	-0.4
48,669	+		Dshi_3649	0.50	+0.7
48,669	+		Dshi_3649	0.50	-0.8
48,685	+		Dshi_3649	0.58	+0.5
48,720	+		Dshi_3649	0.76	+0.9
48,748	-				+0.8
48,768	-				+0.7
48,769	-				-0.9
48,780	-				-0.4
48,939	+		Dshi_3650	0.43	-1.4
48,954	+		Dshi_3650	0.46	-0.7
49,020	-		Dshi_3650	0.63	-0.9
49,039	-		Dshi_3650	0.67	-1.3
49,042	-		Dshi_3650	0.68	+0.6
49,103	+		Dshi_3650	0.83	-0.7
49,181	-				-1.1
49,221	+				-0.5
49,222	-				-1.1
49,223	-				-2.8
49,233	-				-0.9
49,235	-				+0.0
49,248	-				-1.7
49,288	-				-0.6
49,295	+		Dshi_3651	0.10	+0.1
49,425	+		Dshi_3651	0.22	+1.1
49,452	+		Dshi_3651	0.25	+0.1
49,486	+		Dshi_3651	0.28	+0.1
49,488	-		Dshi_3651	0.28	+0.3
49,513	-		Dshi_3651	0.30	-0.1
49,513	-		Dshi_3651	0.30	-0.1
49,576	-		Dshi_3651	0.36	+0.0
49,655	-		Dshi_3651	0.44	+0.8
49,663	+		Dshi_3651	0.44	+0.1
49,679	+		Dshi_3651	0.46	+0.4
49,684	+		Dshi_3651	0.46	-2.9
49,739	+		Dshi_3651	0.51	+0.1
49,739	+		Dshi_3651	0.51	+0.6
49,772	+		Dshi_3651	0.54	-1.5
49,783	+		Dshi_3651	0.55	+0.1
49,802	+		Dshi_3651	0.57	-0.9
49,810	-		Dshi_3651	0.58	+0.3
49,810	-		Dshi_3651	0.58	+0.3
49,816	+		Dshi_3651	0.58	-0.2
49,840	+		Dshi_3651	0.61	+1.2
49,855	-		Dshi_3651	0.62	+1.0
49,877	-		Dshi_3651	0.64	-0.1
49,877	-		Dshi_3651	0.64	+0.2
49,885	+		Dshi_3651	0.65	+0.3
49,903	+		Dshi_3651	0.67	-2.9
49,910	-		Dshi_3651	0.67	-0.9
49,910	-		Dshi_3651	0.67	-0.8
49,932	+		Dshi_3651	0.69	+1.6
49,949	-		Dshi_3651	0.71	-0.6
49,968	-		Dshi_3651	0.73	+2.1
50,004	+		Dshi_3651	0.76	-0.4
50,004	+		Dshi_3651	0.76	-0.0
50,044	+		Dshi_3651	0.80	-0.5
50,044	+		Dshi_3651	0.80	-1.0
50,044	+		Dshi_3651	0.80	+2.3
50,044	+		Dshi_3651	0.80	-2.2
50,052	-				+0.1
50,052	-		Dshi_3651	0.80	-0.3
50,062	+		Dshi_3651	0.81	+1.3
50,064	-		Dshi_3651	0.82	-0.0
50,070	-		Dshi_3651	0.82	-0.4
50,070	-		Dshi_3651	0.82	-0.1
50,070	-		Dshi_3651	0.82	-0.3
50,079	+		Dshi_3651	0.83	+1.6
50,093	+		Dshi_3651	0.84	+0.3
50,127	+		Dshi_3651	0.87	-0.3
50,161	+				-1.1
50,162	+				-0.6
50,162	+				+1.3
50,170	-				+0.0
50,177	+				-0.2
50,184	-				-0.8
50,185	-				-1.5
50,247	+				+1.2
50,247	+				-0.1
50,247	+				-0.9
50,247	+				+0.1
50,255	-				-1.3
50,257	+				+0.6
50,265	+				+0.1
50,265	+				+0.3
50,265	+				-1.0
50,265	+				-0.7
50,273	-				-2.2
50,273	-				+0.3
50,279	+				+0.5
50,287	-				-0.5
50,296	-				+0.3
50,319	-				-1.4
50,319	-				+0.0
50,334	+				+0.4
50,334	+				-0.1
50,334	+				-1.7
50,334	+				-0.7
50,334	+				+0.3
50,334	+				+0.3
50,339	+				+0.3
50,342	-				-0.8
50,342	-				-0.9
50,342	-				+0.2
50,342	-				+0.1
50,366	+				-1.0
50,374	-				+0.7
50,388	-				-0.3
50,395	-				-0.0
50,395	-				-2.0
50,396	-				+0.8
50,433	-				+0.2
50,465	-				+1.1
50,470	+				-0.8
50,478	-				-2.9
50,478	-				+0.3
50,478	-				-0.4
50,478	-				-1.3
50,487	+				-0.2
50,487	+				-0.4
50,488	+				+0.4
50,488	+				+0.8
50,488	+				-1.1
50,488	+				+0.2
50,496	-				+0.1
50,496	-				-0.2
50,511	+				+0.1
50,511	+				-2.5
50,516	+				-0.7
50,516	+				-0.7
50,516	+				+0.7
50,519	-				-0.5
50,519	-				-0.2
50,519	-				-0.2
50,519	-				-1.3
50,519	-				-1.5
50,524	-				-1.8
50,549	-				+1.5
50,618	+				+1.0
50,622	-				+1.1
50,626	-				-0.2
50,628	+				-0.7
50,659	+				-1.3
50,659	+				-0.0
50,692	+				+0.7
50,692	+				-0.1
50,700	-				+0.3
50,729	+		Dshi_3652	0.12	+0.7
50,729	+		Dshi_3652	0.12	-0.7
50,737	-		Dshi_3652	0.12	+0.0
50,744	-		Dshi_3652	0.13	+0.3
50,746	+		Dshi_3652	0.13	+0.3
50,746	+		Dshi_3652	0.13	+0.1
50,747	-		Dshi_3652	0.14	+0.7
50,754	-		Dshi_3652	0.14	-0.0
50,764	-		Dshi_3652	0.15	-0.4
50,764	-		Dshi_3652	0.15	+1.1
50,768	-		Dshi_3652	0.16	+1.1
50,800	+		Dshi_3652	0.19	+2.2
50,800	+		Dshi_3652	0.19	-0.2
50,800	+		Dshi_3652	0.19	-0.0
50,802	+		Dshi_3652	0.19	-1.0
50,807	+		Dshi_3652	0.20	-1.7
50,808	-		Dshi_3652	0.20	-1.5
50,812	-		Dshi_3652	0.21	+0.2
50,813	-		Dshi_3652	0.21	+0.3
50,815	+		Dshi_3652	0.21	-0.2
50,815	+		Dshi_3652	0.21	+0.6
50,815	+		Dshi_3652	0.21	-0.6
50,815	-		Dshi_3652	0.21	+0.7
50,815	-		Dshi_3652	0.21	-1.1
50,815	-		Dshi_3652	0.21	+1.0
50,815	-		Dshi_3652	0.21	+1.0
50,815	-		Dshi_3652	0.21	-0.5
50,817	+		Dshi_3652	0.21	-0.0
50,823	-		Dshi_3652	0.22	-0.3
50,823	-		Dshi_3652	0.22	+0.8
50,823	-		Dshi_3652	0.22	-0.3
50,823	-		Dshi_3652	0.22	+1.6
50,823	-		Dshi_3652	0.22	-0.3
50,825	-		Dshi_3652	0.22	-0.1
50,830	+		Dshi_3652	0.23	+0.7
50,830	+		Dshi_3652	0.23	-0.1
50,832	+		Dshi_3652	0.23	-0.1
50,844	-		Dshi_3652	0.24	-2.0
50,882	+		Dshi_3652	0.28	+0.9
50,882	+		Dshi_3652	0.28	-0.1
50,882	+		Dshi_3652	0.28	-1.6
50,882	+		Dshi_3652	0.28	-1.3
50,882	+		Dshi_3652	0.28	+1.0
50,882	+		Dshi_3652	0.28	+0.2
50,882	+		Dshi_3652	0.28	+0.5
50,882	+		Dshi_3652	0.28	-0.3
50,890	-		Dshi_3652	0.29	-2.0
50,916	+		Dshi_3652	0.32	+0.3
50,930	+		Dshi_3652	0.33	+0.7
50,976	+		Dshi_3652	0.38	+0.1
51,004	+		Dshi_3652	0.42	-0.0
51,036	+		Dshi_3652	0.45	-0.4
51,073	+		Dshi_3652	0.49	-0.3
51,073	+		Dshi_3652	0.49	-1.1
51,073	+		Dshi_3652	0.49	-2.4
51,073	+		Dshi_3652	0.49	-0.5
51,081	-		Dshi_3652	0.50	-0.2
51,081	-		Dshi_3652	0.50	-0.8
51,094	-		Dshi_3652	0.51	+0.9
51,094	-		Dshi_3652	0.51	-0.8
51,111	+		Dshi_3652	0.53	-1.1
51,168	+		Dshi_3652	0.59	+0.1
51,168	+		Dshi_3652	0.59	-0.3
51,168	+		Dshi_3652	0.59	-1.0
51,168	+		Dshi_3652	0.59	-0.5
51,168	+		Dshi_3652	0.59	-0.4
51,176	-		Dshi_3652	0.60	-2.0
51,176	-		Dshi_3652	0.60	+1.5
51,176	-		Dshi_3652	0.60	-0.0
51,176	-		Dshi_3652	0.60	+0.7
51,176	-		Dshi_3652	0.60	+0.3
51,181	+		Dshi_3652	0.61	-0.6
51,200	+		Dshi_3652	0.63	-0.7
51,228	-		Dshi_3652	0.66	-1.3