Experiment: Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT4131 and BT4132 are separated by 372 nucleotides BT4132 and BT4133 are separated by 15 nucleotides
BT4131: BT4131 - conserved hypothetical protein (NCBI ptt file), at 5,417,951 to 5,418,736
BT4131
BT4132: BT4132 - putative chitobiase (NCBI ptt file), at 5,419,109 to 5,420,287
BT4132
BT4133: BT4133 - hypothetical protein (NCBI ptt file), at 5,420,303 to 5,421,565
BT4133
Position (kb) 5419
5420
5421 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 5418.224 kb on + strand, within BT4131 at 5418.225 kb on - strand, within BT4131 at 5418.304 kb on + strand, within BT4131 at 5418.345 kb on - strand, within BT4131 at 5418.406 kb on + strand, within BT4131 at 5418.406 kb on + strand, within BT4131 at 5418.407 kb on - strand, within BT4131 at 5418.407 kb on - strand, within BT4131 at 5418.407 kb on - strand, within BT4131 at 5418.468 kb on - strand, within BT4131 at 5418.522 kb on + strand, within BT4131 at 5418.540 kb on - strand, within BT4131 at 5418.541 kb on + strand, within BT4131 at 5418.541 kb on + strand, within BT4131 at 5418.541 kb on + strand, within BT4131 at 5418.541 kb on + strand, within BT4131 at 5418.541 kb on + strand, within BT4131 at 5418.542 kb on - strand, within BT4131 at 5418.542 kb on - strand, within BT4131 at 5418.542 kb on - strand, within BT4131 at 5418.544 kb on - strand, within BT4131 at 5418.544 kb on - strand, within BT4131 at 5418.544 kb on - strand, within BT4131 at 5418.589 kb on + strand, within BT4131 at 5418.665 kb on - strand at 5418.711 kb on - strand at 5418.747 kb on + strand at 5418.762 kb on + strand at 5418.766 kb on + strand at 5418.791 kb on + strand at 5418.792 kb on - strand at 5418.793 kb on + strand at 5418.800 kb on - strand at 5418.826 kb on + strand at 5418.827 kb on - strand at 5418.865 kb on + strand at 5418.887 kb on + strand at 5418.887 kb on + strand at 5418.926 kb on + strand at 5418.963 kb on + strand at 5418.964 kb on - strand at 5418.964 kb on - strand at 5418.983 kb on - strand at 5419.024 kb on - strand at 5419.029 kb on - strand at 5419.030 kb on + strand at 5419.030 kb on + strand at 5419.030 kb on + strand at 5419.031 kb on - strand at 5419.031 kb on - strand at 5419.055 kb on - strand at 5419.127 kb on - strand at 5419.133 kb on - strand at 5419.145 kb on - strand at 5419.191 kb on + strand at 5419.215 kb on - strand at 5419.217 kb on + strand at 5419.222 kb on + strand at 5419.234 kb on + strand, within BT4132 at 5419.244 kb on - strand, within BT4132 at 5419.268 kb on + strand, within BT4132 at 5419.352 kb on + strand, within BT4132 at 5419.352 kb on + strand, within BT4132 at 5419.359 kb on - strand, within BT4132 at 5419.389 kb on - strand, within BT4132 at 5419.394 kb on + strand, within BT4132 at 5419.395 kb on - strand, within BT4132 at 5419.470 kb on - strand, within BT4132 at 5419.558 kb on + strand, within BT4132 at 5419.558 kb on + strand, within BT4132 at 5419.559 kb on - strand, within BT4132 at 5419.561 kb on - strand, within BT4132 at 5419.561 kb on - strand, within BT4132 at 5419.568 kb on - strand, within BT4132 at 5419.596 kb on - strand, within BT4132 at 5419.596 kb on - strand, within BT4132 at 5419.600 kb on + strand, within BT4132 at 5419.602 kb on + strand, within BT4132 at 5419.606 kb on - strand, within BT4132 at 5419.606 kb on - strand, within BT4132 at 5419.674 kb on + strand, within BT4132 at 5419.674 kb on + strand, within BT4132 at 5419.715 kb on + strand, within BT4132 at 5419.715 kb on + strand, within BT4132 at 5419.715 kb on + strand, within BT4132 at 5419.780 kb on - strand, within BT4132 at 5419.784 kb on - strand, within BT4132 at 5419.828 kb on + strand, within BT4132 at 5419.828 kb on + strand, within BT4132 at 5419.904 kb on + strand, within BT4132 at 5419.904 kb on + strand, within BT4132 at 5419.904 kb on + strand, within BT4132 at 5419.954 kb on + strand, within BT4132 at 5419.972 kb on + strand, within BT4132 at 5420.008 kb on + strand, within BT4132 at 5420.109 kb on - strand, within BT4132 at 5420.176 kb on - strand at 5420.199 kb on + strand at 5420.217 kb on + strand at 5420.218 kb on - strand at 5420.218 kb on - strand at 5420.218 kb on - strand at 5420.268 kb on + strand at 5420.278 kb on + strand at 5420.278 kb on + strand at 5420.297 kb on - strand at 5420.353 kb on - strand at 5420.454 kb on - strand, within BT4133 at 5420.497 kb on + strand, within BT4133 at 5420.497 kb on + strand, within BT4133 at 5420.497 kb on + strand, within BT4133 at 5420.497 kb on + strand, within BT4133 at 5420.499 kb on + strand, within BT4133 at 5420.500 kb on - strand, within BT4133 at 5420.539 kb on + strand, within BT4133 at 5420.539 kb on + strand, within BT4133 at 5420.564 kb on + strand, within BT4133 at 5420.580 kb on + strand, within BT4133 at 5420.581 kb on - strand, within BT4133 at 5420.584 kb on + strand, within BT4133 at 5420.585 kb on - strand, within BT4133 at 5420.611 kb on - strand, within BT4133 at 5420.611 kb on - strand, within BT4133 at 5420.614 kb on + strand, within BT4133 at 5420.615 kb on - strand, within BT4133 at 5420.615 kb on - strand, within BT4133 at 5420.636 kb on - strand, within BT4133 at 5420.765 kb on - strand, within BT4133 at 5420.791 kb on - strand, within BT4133 at 5420.964 kb on - strand, within BT4133 at 5421.019 kb on + strand, within BT4133 at 5421.019 kb on + strand, within BT4133 at 5421.019 kb on + strand, within BT4133 at 5421.041 kb on + strand, within BT4133 at 5421.074 kb on + strand, within BT4133 at 5421.275 kb on + strand, within BT4133 at 5421.275 kb on + strand, within BT4133
Per-strain Table
Position Strand Gene LocusTag Fraction Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM remove 5,418,224 + BT4131 0.35 -1.2 5,418,225 - BT4131 0.35 -0.8 5,418,304 + BT4131 0.45 -0.0 5,418,345 - BT4131 0.50 -2.0 5,418,406 + BT4131 0.58 -1.2 5,418,406 + BT4131 0.58 -1.6 5,418,407 - BT4131 0.58 -4.1 5,418,407 - BT4131 0.58 -0.7 5,418,407 - BT4131 0.58 -0.5 5,418,468 - BT4131 0.66 +2.0 5,418,522 + BT4131 0.73 -1.5 5,418,540 - BT4131 0.75 +1.5 5,418,541 + BT4131 0.75 -0.6 5,418,541 + BT4131 0.75 -2.0 5,418,541 + BT4131 0.75 -1.6 5,418,541 + BT4131 0.75 -1.5 5,418,541 + BT4131 0.75 +1.0 5,418,542 - BT4131 0.75 -3.0 5,418,542 - BT4131 0.75 -2.9 5,418,542 - BT4131 0.75 -0.1 5,418,544 - BT4131 0.75 -2.0 5,418,544 - BT4131 0.75 -3.0 5,418,544 - BT4131 0.75 -1.6 5,418,589 + BT4131 0.81 -1.0 5,418,665 - -3.4 5,418,711 - -0.5 5,418,747 + -0.0 5,418,762 + +1.0 5,418,766 + -2.0 5,418,791 + +0.4 5,418,792 - -2.9 5,418,793 + -1.0 5,418,800 - -1.0 5,418,826 + -1.0 5,418,827 - +2.2 5,418,865 + +1.0 5,418,887 + -2.2 5,418,887 + -3.3 5,418,926 + -3.4 5,418,963 + -3.3 5,418,964 - -2.1 5,418,964 - -1.0 5,418,983 - -2.0 5,419,024 - -4.6 5,419,029 - -2.6 5,419,030 + -1.0 5,419,030 + -2.7 5,419,030 + +1.3 5,419,031 - -1.3 5,419,031 - -0.8 5,419,055 - -3.0 5,419,127 - -0.0 5,419,133 - -1.3 5,419,145 - -0.5 5,419,191 + -4.1 5,419,215 - -2.7 5,419,217 + -0.6 5,419,222 + -1.6 5,419,234 + BT4132 0.11 -0.3 5,419,244 - BT4132 0.11 +3.0 5,419,268 + BT4132 0.13 -0.0 5,419,352 + BT4132 0.21 -0.0 5,419,352 + BT4132 0.21 -2.6 5,419,359 - BT4132 0.21 -1.2 5,419,389 - BT4132 0.24 -1.0 5,419,394 + BT4132 0.24 -0.0 5,419,395 - BT4132 0.24 -0.5 5,419,470 - BT4132 0.31 +2.0 5,419,558 + BT4132 0.38 -1.6 5,419,558 + BT4132 0.38 -0.6 5,419,559 - BT4132 0.38 +0.4 5,419,561 - BT4132 0.38 -2.2 5,419,561 - BT4132 0.38 -0.0 5,419,568 - BT4132 0.39 -0.0 5,419,596 - BT4132 0.41 -1.7 5,419,596 - BT4132 0.41 +1.3 5,419,600 + BT4132 0.42 -0.5 5,419,602 + BT4132 0.42 -0.3 5,419,606 - BT4132 0.42 -1.0 5,419,606 - BT4132 0.42 -1.0 5,419,674 + BT4132 0.48 -0.0 5,419,674 + BT4132 0.48 -0.9 5,419,715 + BT4132 0.51 -0.6 5,419,715 + BT4132 0.51 -0.0 5,419,715 + BT4132 0.51 -2.0 5,419,780 - BT4132 0.57 -0.0 5,419,784 - BT4132 0.57 -3.9 5,419,828 + BT4132 0.61 +0.8 5,419,828 + BT4132 0.61 -2.4 5,419,904 + BT4132 0.67 +0.6 5,419,904 + BT4132 0.67 -1.2 5,419,904 + BT4132 0.67 -1.4 5,419,954 + BT4132 0.72 -0.6 5,419,972 + BT4132 0.73 +2.0 5,420,008 + BT4132 0.76 -4.6 5,420,109 - BT4132 0.85 -0.0 5,420,176 - -1.9 5,420,199 + -2.0 5,420,217 + -2.4 5,420,218 - -3.6 5,420,218 - -1.0 5,420,218 - -0.6 5,420,268 + -0.0 5,420,278 + +0.8 5,420,278 + -3.2 5,420,297 - -1.9 5,420,353 - -0.0 5,420,454 - BT4133 0.12 -0.4 5,420,497 + BT4133 0.15 -1.0 5,420,497 + BT4133 0.15 -0.4 5,420,497 + BT4133 0.15 -2.6 5,420,497 + BT4133 0.15 -2.4 5,420,499 + BT4133 0.16 -1.0 5,420,500 - BT4133 0.16 -0.2 5,420,539 + BT4133 0.19 -1.0 5,420,539 + BT4133 0.19 -2.6 5,420,564 + BT4133 0.21 -1.5 5,420,580 + BT4133 0.22 -0.4 5,420,581 - BT4133 0.22 -0.9 5,420,584 + BT4133 0.22 -2.4 5,420,585 - BT4133 0.22 -4.4 5,420,611 - BT4133 0.24 -3.0 5,420,611 - BT4133 0.24 -1.6 5,420,614 + BT4133 0.25 -2.6 5,420,615 - BT4133 0.25 -0.0 5,420,615 - BT4133 0.25 -3.6 5,420,636 - BT4133 0.26 -1.0 5,420,765 - BT4133 0.37 -1.4 5,420,791 - BT4133 0.39 -1.7 5,420,964 - BT4133 0.52 -1.7 5,421,019 + BT4133 0.57 -2.4 5,421,019 + BT4133 0.57 -2.8 5,421,019 + BT4133 0.57 -2.8 5,421,041 + BT4133 0.58 -2.0 5,421,074 + BT4133 0.61 -1.0 5,421,275 + BT4133 0.77 -2.4 5,421,275 + BT4133 0.77 -1.8
Or see this region's nucleotide sequence