Experiment: MoLS4 with L-Histidine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0440 and ade are separated by 150 nucleotides ade and DVU0442 are separated by 446 nucleotides
DVU0440: DVU0440 - conserved hypothetical protein (TIGR), at 496,131 to 497,462
DVU0440
DVU0441: ade - adenine deaminase (TIGR), at 497,613 to 499,340
ade
DVU0442: DVU0442 - phoH-related protein (TIGR), at 499,787 to 500,983
DVU0442
Position (kb) 497
498
499
500 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 496.738 kb on - strand, within DVU0440 at 496.785 kb on + strand, within DVU0440 at 496.793 kb on - strand, within DVU0440 at 496.793 kb on - strand, within DVU0440 at 496.842 kb on + strand, within DVU0440 at 496.842 kb on + strand, within DVU0440 at 496.843 kb on + strand, within DVU0440 at 496.850 kb on - strand, within DVU0440 at 496.850 kb on - strand, within DVU0440 at 496.850 kb on - strand, within DVU0440 at 496.875 kb on + strand, within DVU0440 at 496.947 kb on + strand, within DVU0440 at 497.093 kb on + strand, within DVU0440 at 497.137 kb on + strand, within DVU0440 at 497.146 kb on - strand, within DVU0440 at 497.192 kb on - strand, within DVU0440 at 497.271 kb on - strand, within DVU0440 at 497.307 kb on + strand, within DVU0440 at 497.317 kb on - strand, within DVU0440 at 497.351 kb on + strand at 497.524 kb on - strand at 497.585 kb on - strand at 497.611 kb on + strand at 497.721 kb on + strand at 497.782 kb on - strand at 497.787 kb on + strand, within ade at 497.811 kb on + strand, within ade at 497.870 kb on + strand, within ade at 497.878 kb on - strand, within ade at 497.955 kb on - strand, within ade at 498.020 kb on + strand, within ade at 498.037 kb on + strand, within ade at 498.090 kb on + strand, within ade at 498.119 kb on + strand, within ade at 498.127 kb on - strand, within ade at 498.137 kb on + strand, within ade at 498.157 kb on + strand, within ade at 498.175 kb on + strand, within ade at 498.204 kb on + strand, within ade at 498.219 kb on + strand, within ade at 498.307 kb on + strand, within ade at 498.398 kb on + strand, within ade at 498.415 kb on + strand, within ade at 498.432 kb on + strand, within ade at 498.440 kb on - strand, within ade at 498.470 kb on - strand, within ade at 498.566 kb on - strand, within ade at 498.586 kb on + strand, within ade at 498.607 kb on - strand, within ade at 498.633 kb on - strand, within ade at 498.728 kb on + strand, within ade at 498.736 kb on - strand, within ade at 498.741 kb on - strand, within ade at 498.759 kb on - strand, within ade at 498.761 kb on + strand, within ade at 498.761 kb on + strand, within ade at 498.769 kb on - strand, within ade at 498.812 kb on + strand, within ade at 498.839 kb on + strand, within ade at 498.866 kb on - strand, within ade at 498.866 kb on - strand, within ade at 498.906 kb on + strand, within ade at 498.928 kb on + strand, within ade at 498.936 kb on - strand, within ade at 499.229 kb on - strand at 499.305 kb on - strand at 499.336 kb on + strand at 499.344 kb on - strand at 499.344 kb on - strand at 499.394 kb on + strand at 499.402 kb on - strand at 499.402 kb on - strand at 499.402 kb on - strand at 499.402 kb on - strand at 499.489 kb on + strand at 499.497 kb on - strand at 499.497 kb on - strand at 499.497 kb on - strand at 499.509 kb on + strand at 499.534 kb on + strand at 499.537 kb on - strand at 499.547 kb on - strand at 499.565 kb on - strand at 499.580 kb on + strand at 499.730 kb on + strand at 499.738 kb on - strand at 499.740 kb on - strand at 499.767 kb on + strand at 499.880 kb on - strand at 499.880 kb on - strand at 499.895 kb on + strand at 499.895 kb on + strand at 499.971 kb on + strand, within DVU0442 at 499.972 kb on - strand, within DVU0442 at 499.985 kb on + strand, within DVU0442 at 500.018 kb on + strand, within DVU0442 at 500.026 kb on - strand, within DVU0442 at 500.026 kb on - strand, within DVU0442 at 500.026 kb on - strand, within DVU0442 at 500.084 kb on - strand, within DVU0442 at 500.106 kb on - strand, within DVU0442 at 500.133 kb on + strand, within DVU0442 at 500.183 kb on + strand, within DVU0442 at 500.191 kb on - strand, within DVU0442 at 500.199 kb on + strand, within DVU0442 at 500.207 kb on - strand, within DVU0442
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Histidine as nutrient 10mM remove 496,738 - DVU0440 0.46 +0.0 496,785 + DVU0440 0.49 -0.5 496,793 - DVU0440 0.50 -0.2 496,793 - DVU0440 0.50 -1.8 496,842 + DVU0440 0.53 +0.4 496,842 + DVU0440 0.53 +0.0 496,843 + DVU0440 0.53 -1.5 496,850 - DVU0440 0.54 -0.0 496,850 - DVU0440 0.54 -0.8 496,850 - DVU0440 0.54 -0.1 496,875 + DVU0440 0.56 -1.3 496,947 + DVU0440 0.61 -0.9 497,093 + DVU0440 0.72 +0.9 497,137 + DVU0440 0.76 +0.2 497,146 - DVU0440 0.76 -0.8 497,192 - DVU0440 0.80 -1.1 497,271 - DVU0440 0.86 -0.0 497,307 + DVU0440 0.88 -2.6 497,317 - DVU0440 0.89 +0.2 497,351 + -0.4 497,524 - +0.6 497,585 - -2.5 497,611 + +0.3 497,721 + +0.1 497,782 - -1.3 497,787 + ade DVU0441 0.10 -2.2 497,811 + ade DVU0441 0.11 +0.4 497,870 + ade DVU0441 0.15 -0.5 497,878 - ade DVU0441 0.15 -1.4 497,955 - ade DVU0441 0.20 +0.3 498,020 + ade DVU0441 0.24 +3.2 498,037 + ade DVU0441 0.25 -2.0 498,090 + ade DVU0441 0.28 -2.3 498,119 + ade DVU0441 0.29 +0.5 498,127 - ade DVU0441 0.30 +0.4 498,137 + ade DVU0441 0.30 -0.2 498,157 + ade DVU0441 0.31 +0.3 498,175 + ade DVU0441 0.33 -0.4 498,204 + ade DVU0441 0.34 -0.0 498,219 + ade DVU0441 0.35 -0.2 498,307 + ade DVU0441 0.40 -0.8 498,398 + ade DVU0441 0.45 +0.4 498,415 + ade DVU0441 0.46 +1.6 498,432 + ade DVU0441 0.47 +0.4 498,440 - ade DVU0441 0.48 +0.2 498,470 - ade DVU0441 0.50 -0.2 498,566 - ade DVU0441 0.55 +1.2 498,586 + ade DVU0441 0.56 +0.5 498,607 - ade DVU0441 0.58 -0.7 498,633 - ade DVU0441 0.59 -1.2 498,728 + ade DVU0441 0.65 +0.0 498,736 - ade DVU0441 0.65 -0.7 498,741 - ade DVU0441 0.65 +0.6 498,759 - ade DVU0441 0.66 +0.4 498,761 + ade DVU0441 0.66 +0.1 498,761 + ade DVU0441 0.66 +0.7 498,769 - ade DVU0441 0.67 +0.1 498,812 + ade DVU0441 0.69 -0.9 498,839 + ade DVU0441 0.71 +0.1 498,866 - ade DVU0441 0.73 -1.4 498,866 - ade DVU0441 0.73 -0.6 498,906 + ade DVU0441 0.75 +0.5 498,928 + ade DVU0441 0.76 -0.1 498,936 - ade DVU0441 0.77 -1.3 499,229 - -0.7 499,305 - -2.1 499,336 + -0.4 499,344 - -1.0 499,344 - +0.5 499,394 + -0.1 499,402 - +0.8 499,402 - -0.7 499,402 - +0.1 499,402 - -0.2 499,489 + +0.6 499,497 - -0.3 499,497 - +0.7 499,497 - +0.6 499,509 + -0.9 499,534 + +0.2 499,537 - -1.7 499,547 - +0.2 499,565 - -2.4 499,580 + -0.4 499,730 + +0.2 499,738 - +1.0 499,740 - -1.8 499,767 + +0.5 499,880 - -1.4 499,880 - -2.1 499,895 + +0.2 499,895 + +1.3 499,971 + DVU0442 0.15 -0.0 499,972 - DVU0442 0.15 -0.2 499,985 + DVU0442 0.17 +0.2 500,018 + DVU0442 0.19 -0.4 500,026 - DVU0442 0.20 +0.1 500,026 - DVU0442 0.20 +0.4 500,026 - DVU0442 0.20 -0.9 500,084 - DVU0442 0.25 -0.7 500,106 - DVU0442 0.27 +0.6 500,133 + DVU0442 0.29 -0.4 500,183 + DVU0442 0.33 -0.0 500,191 - DVU0442 0.34 -0.4 500,199 + DVU0442 0.34 -0.7 500,207 - DVU0442 0.35 -0.4
Or see this region's nucleotide sequence